STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
xylGD-xylose transport ATP-binding protein xylG; Part of the ABC transporter complex XylFGH involved in xylose import. Responsible for energy coupling to the transport system. Belongs to the ABC transporter superfamily. Xylose importer (TC 3.A.1.2.4) family. (525 aa)    
Predicted Functional Partners:
xylF
D-xylose-binding periplasmic protein precursor; Escherichia coli K-12 ortholog: b3566; Escherichia coli O157:H7 ortholog: z4991.
 
 0.999
xylH
Xylose transport system permease protein xylH; Part of the binding-protein-dependent transport system for D- xylose. Probably responsible for the translocation of the substrate across the membrane (By similarity); Belongs to the binding-protein-dependent transport system permease family. AraH/RbsC subfamily.
 
 0.999
rbsC
Ribose transport system permease protein rbsC; Part of the ABC transporter complex RbsABC involved in ribose import. Probably responsible for the translocation of the substrate across the membrane.
 
 0.857
c4015
Ribose transport system permease protein rbsC; Escherichia coli K-12 ortholog: b3750; Escherichia coli O157:H7 ortholog: z5690; Belongs to the binding-protein-dependent transport system permease family.
 
 0.856
yphD
Hypothetical ABC transporter permease protein yphD; Escherichia coli K-12 ortholog: b2546; Escherichia coli O157:H7 ortholog: z3819; Belongs to the binding-protein-dependent transport system permease family.
 
 0.852
yjcV
D-allose transport system permease protein alsC; Escherichia coli K-12 ortholog: b4086; Escherichia coli O157:H7 ortholog: z5251; Belongs to the binding-protein-dependent transport system permease family.
 
 0.851
araH
High-affinity L-arabinose transport system; Escherichia coli K-12 ortholog: b1899; Escherichia coli O157:H7 ortholog: z2951; Belongs to the binding-protein-dependent transport system permease family.
 
 0.844
ytfT
Hypothetical ABC transporter permease protein ytfT; Escherichia coli K-12 ortholog: b4230; Escherichia coli O157:H7 ortholog: z5840; Belongs to the binding-protein-dependent transport system permease family.
 
 0.840
yjfF
Hypothetical ABC transporter permease protein yjfF; Escherichia coli K-12 ortholog: b4231; Escherichia coli O157:H7 ortholog: z5841; Belongs to the binding-protein-dependent transport system permease family.
 
 0.839
xylR
Xylose operon Regulatory protein; Regulatory protein for the xylBAFGHR operon.
  
  
 0.821
Your Current Organism:
Escherichia coli CFT073
NCBI taxonomy Id: 199310
Other names: E. coli CFT073, Escherichia coli str. CFT073, Escherichia coli strain CFT073
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