STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
upaGPutative adhesin; Mediates aggregation, biofilm formation and adhesion to a range of extracellular matrix (ECM) proteins, such as fibronectin, fibrinogen, laminin and collagen types I, II, III, and V. Mediates adhesion to human T24 bladder epithelial cells. (1778 aa)    
Predicted Functional Partners:
c5215
Conserved hypothetical protein; Residues 5 to 587 of 587 are 96.39 pct identical to residues 1 to 583 of 774 from GenPept.129 : >gb|AAK00457.1| (AF200692) unknown [Shigella flexneri 2a].
  
     0.755
c3508
Hypothetical protein; Escherichia coli O157:H7 ortholog: z4269.
  
     0.754
c3031
SinH homolog; Residues 11 to 735 of 735 are 72.77 pct identical to residues 1 to 730 of 730 from GenPept.129 : >gb|AAL21411.1| (AE008814) Similar to Escherichia coli intimin and Y. pestis invasin proteins [Salmonella typhimurium LT2].
  
   
 0.745
c3523
Conserved hypothetical protein; Escherichia coli O157:H7 ortholog: z4282.
  
     0.743
c0976
Hypothetical protein; Residues 1 to 947 of 947 are 97.67 pct identical to residues 79 to 1025 of 1025 from GenPept.129 : >emb|CAD09461.1| (AL627279) hypothetical protein [Salmonella enterica subsp. enterica serovar Typhi].
  
     0.734
yaaW
Hypothetical protein yaaW; Escherichia coli K-12 ortholog: b0011; Escherichia coli O157:H7 ortholog: z0011.
  
     0.710
c4423
Conserved hypothetical protein; Escherichia coli O157:H7 ortholog: z5028.
     
 0.692
c0478
Putative structural protein; Escherichia coli O157:H7 ortholog: z0469; SapA-like.
  
   
 0.683
c1590
Putative tail component of prophage; Escherichia coli O157:H7 ortholog: z2145.
 
     0.632
c3154
Putative tail component of prophage; Escherichia coli O157:H7 ortholog: z2145.
 
     0.631
Your Current Organism:
Escherichia coli CFT073
NCBI taxonomy Id: 199310
Other names: E. coli CFT073, Escherichia coli str. CFT073, Escherichia coli strain CFT073
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.