STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
DES48_10226Unannotated protein. (182 aa)    
Predicted Functional Partners:
menF
Unannotated protein; Catalyzes the conversion of chorismate to isochorismate.
  
 
 0.586
nagB
Unannotated protein; Catalyzes the reversible isomerization-deamination of glucosamine 6-phosphate (GlcN6P) to form fructose 6-phosphate (Fru6P) and ammonium ion.
  
 
  0.556
DES48_10225
Unannotated protein.
       0.526
DES48_10423
Unannotated protein; Belongs to the NAPRTase family.
  
 
 0.519
DES48_10373
Unannotated protein.
  
  
  0.515
DES48_102176
Unannotated protein.
  
 0.507
cinA
Unannotated protein; Belongs to the CinA family.
    
 0.469
DES48_102182
Unannotated protein.
  
 
 0.465
birA
Unannotated protein; Acts both as a biotin--[acetyl-CoA-carboxylase] ligase and a repressor; Belongs to the biotin--protein ligase family.
     
 0.463
DES48_1162
Unannotated protein; Belongs to the NadC/ModD family.
   
 0.461
Your Current Organism:
Paraliobacillus ryukyuensis
NCBI taxonomy Id: 200904
Other names: DSM 15140, IAM 15001, JCM 21472, NBRC 100001, NRIC 0520, P. ryukyuensis, Paraliobacillus ryukyuensis Ishikawa et al. 2003, strain O15-7
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.