STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
X777_13249F-box/LRR-repeat protein. (443 aa)    
Predicted Functional Partners:
DMN91_012093
S-phase kinase-associated protein; Belongs to the SKP1 family.
    
 0.938
DMN91_005383
Cullin-1; Belongs to the cullin family.
    
 0.753
X777_14575
Geranylgeranyl transferase type-2 subunit beta; Catalyzes the transfer of a geranylgeranyl moiety from geranylgeranyl diphosphate to both cysteines of proteins with the C- terminal sequence -XXCC, -XCXC and -CCXX.
    
 
 0.691
X777_16932
NEDD8.
    
 0.650
X777_02341
Cullin-associated NEDD8-dissociated protein.
     
 0.642
DMN91_001762
Cullin-3; Belongs to the cullin family.
    
 0.581
DMN91_011450
F-box only protein.
   
 
 0.528
DMN91_011437
RING-box protein 1A.
     
 0.521
DMN91_005219
Cullin-2; Belongs to the cullin family.
    
  0.480
X777_09960
F-box only protein.
   
 
 0.463
Your Current Organism:
Ooceraea biroi
NCBI taxonomy Id: 2015173
Other names: Cerapachys biroi, O. biroi, clonal raider ant
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.