STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SHE64837.1L-gulonolactone oxidase. (437 aa)    
Predicted Functional Partners:
SHE64874.1
D-serine deaminase, pyridoxal phosphate-dependent.
    0.909
SHF31476.1
Glutamate synthase (NADPH/NADH) large chain.
    
 0.783
SHG66911.1
Beta-galactosidase.
    
  0.733
SHE45964.1
2-oxoglutarate ferredoxin oxidoreductase subunit alpha.
    
  0.706
SHF03313.1
Catalase; Serves to protect cells from the toxic effects of hydrogen peroxide.
  
  0.649
SHE69520.1
FMN-dependent dehydrogenase, includes L-lactate dehydrogenase and type II isopentenyl diphosphate isomerase.
  
 0.622
SHG04828.1
Electron transfer flavoprotein beta subunit.
  
 
 0.603
SHG04855.1
Electron transfer flavoprotein alpha subunit apoprotein.
  
 
 0.603
SHF05413.1
4-hydroxybenzoate polyprenyltransferase; Belongs to the UbiA prenyltransferase family.
    
 0.583
SHE80114.1
Glutamine cyclotransferase.
    
   0.485
Your Current Organism:
Streptoalloteichus hindustanus
NCBI taxonomy Id: 2017
Other names: ATCC 31217, DSM 44523, IFO 15115, JCM 3268, NBRC 15115, NRRL B-11280, S. hindustanus, Streptalloteichus hindustanensis, Streptalloteichus hindustanus, Streptoalloteichus hindustanensis, VKM Ac-683, strain C677-91
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