STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Cthe_1849PFAM: Heavy metal transport/detoxification protein; KEGG: cce:Ccel_0745 heavy metal transport/detoxification protein. (499 aa)    
Predicted Functional Partners:
Cthe_1848
KEGG: cce:Ccel_0746 copper-translocating P-type ATPase; TIGRFAM: copper-translocating P-type ATPase; heavy metal translocating P-type ATPase; ATPase, P-type (transporting), HAD superfamily, subfamily IC; PFAM: E1-E2 ATPase-associated domain protein; Heavy metal transport/detoxification protein; Haloacid dehalogenase domain protein hydrolase.
 
 
0.953
Cthe_1850
KEGG: cce:Ccel_1716 hypothetical protein.
 
    0.917
Cthe_0244
KEGG: aoe:Clos_1087 heavy metal translocating P-type ATPase; TIGRFAM: heavy metal translocating P-type ATPase; cadmium-translocating P-type ATPase; ATPase, P-type (transporting), HAD superfamily, subfamily IC; PFAM: E1-E2 ATPase-associated domain protein; Heavy metal transport/detoxification protein; Haloacid dehalogenase domain protein hydrolase.
  
 
 0.900
Cthe_1846
Integral membrane sensor signal transduction histidine kinase; KEGG: cce:Ccel_1713 histidine kinase; PFAM: ATP-binding region ATPase domain protein; histidine kinase HAMP region domain protein; histidine kinase A domain protein; SMART: ATP-binding region ATPase domain protein; histidine kinase A domain protein; histidine kinase HAMP region domain protein.
 
    0.831
Cthe_1811
Transcriptional repressor, CopY family; PFAM: Penicillinase repressor; KEGG: dhd:Dhaf_3788 transcriptional repressor, CopY family.
  
  
 0.618
Cthe_0376
Transcriptional repressor, CopY family; PFAM: Penicillinase repressor; KEGG: dsy:DSY1088 hypothetical protein.
  
  
 0.616
Cthe_1589
Transcriptional repressor, CopY family; PFAM: Penicillinase repressor; KEGG: hmo:HM1_2921 hypothetical protein.
  
  
 0.616
Cthe_3061
Hypothetical protein; KEGG: dhd:Dhaf_3222 peptidase M56 BlaR1.
  
  
 0.616
Cthe_3145
PFAM: Penicillinase repressor; KEGG: dsy:DSY1014 hypothetical protein.
  
  
 0.616
Cthe_0287
Multi-sensor hybrid histidine kinase; KEGG: cvi:CV_1579 two-component hybrid sensor and regulator; PFAM: ATP-binding region ATPase domain protein; response regulator receiver; histidine kinase A domain protein; GAF domain protein; SMART: ATP-binding region ATPase domain protein; histidine kinase A domain protein; response regulator receiver; GAF domain protein.
  
  
 0.515
Your Current Organism:
Hungateiclostridium thermocellum
NCBI taxonomy Id: 203119
Other names: Clostridium thermocellum ATCC 27405, H. thermocellum ATCC 27405, Hungateiclostridium thermocellum ATCC 27405, Ruminiclostridium thermocellum ATCC 27405
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