STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
kptAPhosphotransferase KptA/Tpt1; Removes the 2'-phosphate from RNA via an intermediate in which the phosphate is ADP-ribosylated by NAD followed by a presumed transesterification to release the RNA and generate ADP-ribose 1''-2''- cyclic phosphate (APPR>P). May function as an ADP-ribosylase. (182 aa)    
Predicted Functional Partners:
Cthe_2764
PFAM: TROVE domain-containing protein; KEGG: cbe:Cbei_3557 TROVE domain-containing protein.
  
    0.644
Cthe_3126
PFAM: NUDIX hydrolase; KEGG: bbe:BBR47_15250 hypothetical protein.
 
  
 0.600
Cthe_0250
PFAM: protein of unknown function UPF0027; KEGG: aoe:Clos_1938 hypothetical protein.
 
   
 0.543
Cthe_0028
KEGG: cby:CLM_2617 hypothetical protein.
 
     0.517
Cthe_3058
KEGG: tdn:Suden_1217 hypothetical protein.
  
    0.495
Cthe_3060
KEGG: bhy:BHWA1_00897 hypothetical protein.
       0.438
Cthe_3061
Hypothetical protein; KEGG: dhd:Dhaf_3222 peptidase M56 BlaR1.
  
    0.412
Cthe_1373
PFAM: YD repeat-containing protein; KEGG: cbe:Cbei_4376 YD repeat-containing protein.
 
     0.408
Cthe_0009
PFAM: YD repeat-containing protein; KEGG: cbe:Cbei_4376 YD repeat-containing protein.
 
    0.406
Cthe_0004
PFAM: YD repeat-containing protein; KEGG: cbe:Cbei_4376 YD repeat-containing protein.
 
     0.405
Your Current Organism:
Hungateiclostridium thermocellum
NCBI taxonomy Id: 203119
Other names: Clostridium thermocellum ATCC 27405, H. thermocellum ATCC 27405, Hungateiclostridium thermocellum ATCC 27405, Ruminiclostridium thermocellum ATCC 27405
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