Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 annotation | node2 annotation | score |
Sde_0264 | Sde_0766 | ATP-binding region, ATPase-like protein. | Periplasmic binding protein/LacI transcriptional regulator. | 0.979 |
Sde_0264 | Sde_1409 | ATP-binding region, ATPase-like protein. | ATP-binding region, ATPase-like protein. | 0.983 |
Sde_0264 | Sde_1923 | ATP-binding region, ATPase-like protein. | Response regulator receiver. | 0.985 |
Sde_0264 | Sde_2240 | ATP-binding region, ATPase-like protein. | ATP-binding region, ATPase-like protein. | 0.984 |
Sde_0264 | Sde_2918 | ATP-binding region, ATPase-like protein. | Cache sensor hybrid histidine kinase. | 0.864 |
Sde_0264 | Sde_3119 | ATP-binding region, ATPase-like protein. | ATP-binding region, ATPase-like protein. | 0.984 |
Sde_0264 | Sde_3120 | ATP-binding region, ATPase-like protein. | ATP-binding region, ATPase-like protein. | 0.987 |
Sde_0766 | Sde_0264 | Periplasmic binding protein/LacI transcriptional regulator. | ATP-binding region, ATPase-like protein. | 0.979 |
Sde_0766 | Sde_0767 | Periplasmic binding protein/LacI transcriptional regulator. | ABC transporter related. | 0.998 |
Sde_0766 | Sde_0768 | Periplasmic binding protein/LacI transcriptional regulator. | Inner-membrane translocator; Belongs to the binding-protein-dependent transport system permease family. | 0.999 |
Sde_0766 | Sde_0769 | Periplasmic binding protein/LacI transcriptional regulator. | Inner-membrane translocator; Belongs to the binding-protein-dependent transport system permease family. | 0.999 |
Sde_0766 | Sde_1409 | Periplasmic binding protein/LacI transcriptional regulator. | ATP-binding region, ATPase-like protein. | 0.990 |
Sde_0766 | Sde_1923 | Periplasmic binding protein/LacI transcriptional regulator. | Response regulator receiver. | 0.943 |
Sde_0766 | Sde_2240 | Periplasmic binding protein/LacI transcriptional regulator. | ATP-binding region, ATPase-like protein. | 0.943 |
Sde_0766 | Sde_2918 | Periplasmic binding protein/LacI transcriptional regulator. | Cache sensor hybrid histidine kinase. | 0.949 |
Sde_0766 | Sde_3119 | Periplasmic binding protein/LacI transcriptional regulator. | ATP-binding region, ATPase-like protein. | 0.945 |
Sde_0766 | Sde_3120 | Periplasmic binding protein/LacI transcriptional regulator. | ATP-binding region, ATPase-like protein. | 0.959 |
Sde_0767 | Sde_0766 | ABC transporter related. | Periplasmic binding protein/LacI transcriptional regulator. | 0.998 |
Sde_0767 | Sde_0768 | ABC transporter related. | Inner-membrane translocator; Belongs to the binding-protein-dependent transport system permease family. | 0.998 |
Sde_0767 | Sde_0769 | ABC transporter related. | Inner-membrane translocator; Belongs to the binding-protein-dependent transport system permease family. | 0.999 |
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