Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
Sde_0888 | Sde_0891 | Sde_0888 | Sde_0891 | Fumarase; Catalyzes the reversible hydration of fumarate to (S)-malate. Belongs to the class-I fumarase family. | Pterin-4-alpha-carbinolamine dehydratase. | 0.445 |
Sde_0888 | Sde_1232 | Sde_0888 | Sde_1232 | Fumarase; Catalyzes the reversible hydration of fumarate to (S)-malate. Belongs to the class-I fumarase family. | Aminotransferase. | 0.859 |
Sde_0890 | Sde_0891 | Sde_0890 | Sde_0891 | Hypothetical protein. | Pterin-4-alpha-carbinolamine dehydratase. | 0.450 |
Sde_0891 | Sde_0888 | Sde_0891 | Sde_0888 | Pterin-4-alpha-carbinolamine dehydratase. | Fumarase; Catalyzes the reversible hydration of fumarate to (S)-malate. Belongs to the class-I fumarase family. | 0.445 |
Sde_0891 | Sde_0890 | Sde_0891 | Sde_0890 | Pterin-4-alpha-carbinolamine dehydratase. | Hypothetical protein. | 0.450 |
Sde_0891 | Sde_0892 | Sde_0891 | Sde_0892 | Pterin-4-alpha-carbinolamine dehydratase. | Diguanylate cyclase/phosphodiesterase. | 0.438 |
Sde_0891 | Sde_1232 | Sde_0891 | Sde_1232 | Pterin-4-alpha-carbinolamine dehydratase. | Aminotransferase. | 0.607 |
Sde_0891 | Sde_2147 | Sde_0891 | Sde_2147 | Pterin-4-alpha-carbinolamine dehydratase. | Prephenate dehydratase. | 0.424 |
Sde_0891 | purL | Sde_0891 | Sde_1478 | Pterin-4-alpha-carbinolamine dehydratase. | Phosphoribosylformylglycinamidine synthase; Phosphoribosylformylglycinamidine synthase involved in the purines biosynthetic pathway. Catalyzes the ATP-dependent conversion of formylglycinamide ribonucleotide (FGAR) and glutamine to yield formylglycinamidine ribonucleotide (FGAM) and glutamate. | 0.410 |
Sde_0892 | Sde_0891 | Sde_0892 | Sde_0891 | Diguanylate cyclase/phosphodiesterase. | Pterin-4-alpha-carbinolamine dehydratase. | 0.438 |
Sde_1232 | Sde_0888 | Sde_1232 | Sde_0888 | Aminotransferase. | Fumarase; Catalyzes the reversible hydration of fumarate to (S)-malate. Belongs to the class-I fumarase family. | 0.859 |
Sde_1232 | Sde_0891 | Sde_1232 | Sde_0891 | Aminotransferase. | Pterin-4-alpha-carbinolamine dehydratase. | 0.607 |
Sde_1232 | Sde_2147 | Sde_1232 | Sde_2147 | Aminotransferase. | Prephenate dehydratase. | 0.958 |
Sde_2147 | Sde_0891 | Sde_2147 | Sde_0891 | Prephenate dehydratase. | Pterin-4-alpha-carbinolamine dehydratase. | 0.424 |
Sde_2147 | Sde_1232 | Sde_2147 | Sde_1232 | Prephenate dehydratase. | Aminotransferase. | 0.958 |
Sde_2147 | purL | Sde_2147 | Sde_1478 | Prephenate dehydratase. | Phosphoribosylformylglycinamidine synthase; Phosphoribosylformylglycinamidine synthase involved in the purines biosynthetic pathway. Catalyzes the ATP-dependent conversion of formylglycinamide ribonucleotide (FGAR) and glutamine to yield formylglycinamidine ribonucleotide (FGAM) and glutamate. | 0.524 |
purL | Sde_0891 | Sde_1478 | Sde_0891 | Phosphoribosylformylglycinamidine synthase; Phosphoribosylformylglycinamidine synthase involved in the purines biosynthetic pathway. Catalyzes the ATP-dependent conversion of formylglycinamide ribonucleotide (FGAR) and glutamine to yield formylglycinamidine ribonucleotide (FGAM) and glutamate. | Pterin-4-alpha-carbinolamine dehydratase. | 0.410 |
purL | Sde_2147 | Sde_1478 | Sde_2147 | Phosphoribosylformylglycinamidine synthase; Phosphoribosylformylglycinamidine synthase involved in the purines biosynthetic pathway. Catalyzes the ATP-dependent conversion of formylglycinamide ribonucleotide (FGAR) and glutamine to yield formylglycinamidine ribonucleotide (FGAM) and glutamate. | Prephenate dehydratase. | 0.524 |