Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
Sde_1864 | Sde_1865 | Sde_1864 | Sde_1865 | Uncharacterized flagellar protein FhlB cytoplasmic domain. | Hypothetical protein. | 0.784 |
Sde_1864 | Sde_1867 | Sde_1864 | Sde_1867 | Uncharacterized flagellar protein FhlB cytoplasmic domain. | Heme exporter protein CcmB; Required for the export of heme to the periplasm for the biogenesis of c-type cytochromes; Belongs to the CcmB/CycW/HelB family. | 0.575 |
Sde_1864 | Sde_1869 | Sde_1864 | Sde_1869 | Uncharacterized flagellar protein FhlB cytoplasmic domain. | Heme exporter protein D; Required for the export of heme to the periplasm for the biogenesis of c-type cytochromes; Belongs to the CcmD/CycX/HelD family. | 0.508 |
Sde_1864 | Sde_1871 | Sde_1864 | Sde_1871 | Uncharacterized flagellar protein FhlB cytoplasmic domain. | Cytochrome c-type biogenesis protein CcmF. | 0.401 |
Sde_1864 | ccmA | Sde_1864 | Sde_1866 | Uncharacterized flagellar protein FhlB cytoplasmic domain. | Heme exporter protein CcmA; Part of the ABC transporter complex CcmAB involved in the biogenesis of c-type cytochromes; once thought to export heme, this seems not to be the case, but its exact role is uncertain. Responsible for energy coupling to the transport system; Belongs to the ABC transporter superfamily. CcmA exporter (TC 3.A.1.107) family. | 0.575 |
Sde_1864 | ccmC | Sde_1864 | Sde_1868 | Uncharacterized flagellar protein FhlB cytoplasmic domain. | Heme exporter protein CcmC; Required for the export of heme to the periplasm for the biogenesis of c-type cytochromes; Belongs to the CcmC/CycZ/HelC family. | 0.508 |
Sde_1864 | ccmE | Sde_1864 | Sde_1870 | Uncharacterized flagellar protein FhlB cytoplasmic domain. | CcmE/CycJ protein; Heme chaperone required for the biogenesis of c-type cytochromes. Transiently binds heme delivered by CcmC and transfers the heme to apo-cytochromes in a process facilitated by CcmF and CcmH. Belongs to the CcmE/CycJ family. | 0.401 |
Sde_1865 | Sde_1864 | Sde_1865 | Sde_1864 | Hypothetical protein. | Uncharacterized flagellar protein FhlB cytoplasmic domain. | 0.784 |
Sde_1865 | Sde_1867 | Sde_1865 | Sde_1867 | Hypothetical protein. | Heme exporter protein CcmB; Required for the export of heme to the periplasm for the biogenesis of c-type cytochromes; Belongs to the CcmB/CycW/HelB family. | 0.518 |
Sde_1865 | Sde_1869 | Sde_1865 | Sde_1869 | Hypothetical protein. | Heme exporter protein D; Required for the export of heme to the periplasm for the biogenesis of c-type cytochromes; Belongs to the CcmD/CycX/HelD family. | 0.426 |
Sde_1865 | ccmA | Sde_1865 | Sde_1866 | Hypothetical protein. | Heme exporter protein CcmA; Part of the ABC transporter complex CcmAB involved in the biogenesis of c-type cytochromes; once thought to export heme, this seems not to be the case, but its exact role is uncertain. Responsible for energy coupling to the transport system; Belongs to the ABC transporter superfamily. CcmA exporter (TC 3.A.1.107) family. | 0.518 |
Sde_1865 | ccmC | Sde_1865 | Sde_1868 | Hypothetical protein. | Heme exporter protein CcmC; Required for the export of heme to the periplasm for the biogenesis of c-type cytochromes; Belongs to the CcmC/CycZ/HelC family. | 0.426 |
Sde_1867 | Sde_1864 | Sde_1867 | Sde_1864 | Heme exporter protein CcmB; Required for the export of heme to the periplasm for the biogenesis of c-type cytochromes; Belongs to the CcmB/CycW/HelB family. | Uncharacterized flagellar protein FhlB cytoplasmic domain. | 0.575 |
Sde_1867 | Sde_1865 | Sde_1867 | Sde_1865 | Heme exporter protein CcmB; Required for the export of heme to the periplasm for the biogenesis of c-type cytochromes; Belongs to the CcmB/CycW/HelB family. | Hypothetical protein. | 0.518 |
Sde_1867 | Sde_1869 | Sde_1867 | Sde_1869 | Heme exporter protein CcmB; Required for the export of heme to the periplasm for the biogenesis of c-type cytochromes; Belongs to the CcmB/CycW/HelB family. | Heme exporter protein D; Required for the export of heme to the periplasm for the biogenesis of c-type cytochromes; Belongs to the CcmD/CycX/HelD family. | 0.957 |
Sde_1867 | Sde_1871 | Sde_1867 | Sde_1871 | Heme exporter protein CcmB; Required for the export of heme to the periplasm for the biogenesis of c-type cytochromes; Belongs to the CcmB/CycW/HelB family. | Cytochrome c-type biogenesis protein CcmF. | 0.926 |
Sde_1867 | Sde_1872 | Sde_1867 | Sde_1872 | Heme exporter protein CcmB; Required for the export of heme to the periplasm for the biogenesis of c-type cytochromes; Belongs to the CcmB/CycW/HelB family. | Periplasmic protein thiol. | 0.903 |
Sde_1867 | Sde_1877 | Sde_1867 | Sde_1877 | Heme exporter protein CcmB; Required for the export of heme to the periplasm for the biogenesis of c-type cytochromes; Belongs to the CcmB/CycW/HelB family. | Cytochrome C biogenesis protein; Possible subunit of a heme lyase. | 0.837 |
Sde_1867 | Sde_1878 | Sde_1867 | Sde_1878 | Heme exporter protein CcmB; Required for the export of heme to the periplasm for the biogenesis of c-type cytochromes; Belongs to the CcmB/CycW/HelB family. | Tetratricopeptide TPR_2. | 0.819 |
Sde_1867 | ccmA | Sde_1867 | Sde_1866 | Heme exporter protein CcmB; Required for the export of heme to the periplasm for the biogenesis of c-type cytochromes; Belongs to the CcmB/CycW/HelB family. | Heme exporter protein CcmA; Part of the ABC transporter complex CcmAB involved in the biogenesis of c-type cytochromes; once thought to export heme, this seems not to be the case, but its exact role is uncertain. Responsible for energy coupling to the transport system; Belongs to the ABC transporter superfamily. CcmA exporter (TC 3.A.1.107) family. | 0.999 |
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