STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Sde_2200Flagellin-like protein; Flagellin is the subunit protein which polymerizes to form the filaments of bacterial flagella. (587 aa)    
Predicted Functional Partners:
Sde_2197
Flagellar protein FliS.
 
 
 0.979
Sde_2198
Flagellar hook-associated 2-like protein; Required for morphogenesis and for the elongation of the flagellar filament by facilitating polymerization of the flagellin monomers at the tip of growing filament. Forms a capping structure, which prevents flagellin subunits (transported through the central channel of the flagellum) from leaking out without polymerization at the distal end.
 
 
 0.967
Sde_2204
Flagellar hook-associated protein; Belongs to the flagella basal body rod proteins family.
 
  
 0.950
Sde_2196
Flagellar protein FliS.
 
 
 0.946
Sde_2203
Flagellin-like protein.
 
  
 0.943
Sde_2212
Flagellar basal-body rod protein FlgC; Belongs to the flagella basal body rod proteins family.
 
  
 0.943
Sde_2187
Flagellar motor switch protein FliG; FliG is one of three proteins (FliG, FliN, FliM) that forms the rotor-mounted switch complex (C ring), located at the base of the basal body. This complex interacts with the CheY and CheZ chemotaxis proteins, in addition to contacting components of the motor that determine the direction of flagellar rotation.
 
  
 0.938
Sde_2210
Flagellar basal body FlaE.
 
  
 0.935
Sde_2185
ATPase FliI/YscN.
 
 
 0.926
Sde_2208
Flagellar basal-body rod FlgG; Belongs to the flagella basal body rod proteins family.
 
 
 0.926
Your Current Organism:
Saccharophagus degradans
NCBI taxonomy Id: 203122
Other names: Microbulbifer degradans 2-40, Microbulbifer sp. 2-40, S. degradans 2-40, Saccharophagus degradans 2-40, Saccharophagus degradans ATCC 43961, Saccharophagus degradans str. 2-40, Saccharophagus degradans strain 2-40, bacterium 2-40
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