Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
OEOE_0905 | OEOE_0906 | OEOE_0905 | OEOE_0906 | Predicted hydrolase of the HAD superfamily. | Predicted GTPase. | 0.900 |
OEOE_0905 | OEOE_0907 | OEOE_0905 | OEOE_0907 | Predicted hydrolase of the HAD superfamily. | RNA-binding protein, KH domain. | 0.851 |
OEOE_0905 | OEOE_0909 | OEOE_0905 | OEOE_0909 | Predicted hydrolase of the HAD superfamily. | NAD metabolism hydrolase of HD superfamily. | 0.858 |
OEOE_0905 | OEOE_0911 | OEOE_0905 | OEOE_0911 | Predicted hydrolase of the HAD superfamily. | SAM-dependent methyltransferase. | 0.784 |
OEOE_0905 | OEOE_0913 | OEOE_0905 | OEOE_0913 | Predicted hydrolase of the HAD superfamily. | Predicted metal-binding, possibly nucleic acid-binding protein. | 0.768 |
OEOE_0905 | OEOE_0914 | OEOE_0905 | OEOE_0914 | Predicted hydrolase of the HAD superfamily. | Preprotein translocase subunit YidC. | 0.716 |
OEOE_0905 | OEOE_0915 | OEOE_0905 | OEOE_0915 | Predicted hydrolase of the HAD superfamily. | rRNA methylase; Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family. | 0.716 |
OEOE_0905 | nadD | OEOE_0905 | OEOE_0908 | Predicted hydrolase of the HAD superfamily. | Nicotinate-nucleotide adenylyltransferase; Catalyzes the reversible adenylation of nicotinate mononucleotide (NaMN) to nicotinic acid adenine dinucleotide (NaAD). | 0.833 |
OEOE_0905 | rsfS | OEOE_0905 | OEOE_0910 | Predicted hydrolase of the HAD superfamily. | Iojap family protein; Functions as a ribosomal silencing factor. Interacts with ribosomal protein L14 (rplN), blocking formation of intersubunit bridge B8. Prevents association of the 30S and 50S ribosomal subunits and the formation of functional ribosomes, thus repressing translation. | 0.802 |
OEOE_0905 | tmcAL | OEOE_0905 | OEOE_0912 | Predicted hydrolase of the HAD superfamily. | Predicted nucleotidyltransferase; Catalyzes the formation of N(4)-acetylcytidine (ac(4)C) at the wobble position of elongator tRNA(Met), using acetate and ATP as substrates. First activates an acetate ion to form acetyladenylate (Ac- AMP) and then transfers the acetyl group to tRNA to form ac(4)C34. | 0.768 |
OEOE_0906 | OEOE_0905 | OEOE_0906 | OEOE_0905 | Predicted GTPase. | Predicted hydrolase of the HAD superfamily. | 0.900 |
OEOE_0906 | OEOE_0907 | OEOE_0906 | OEOE_0907 | Predicted GTPase. | RNA-binding protein, KH domain. | 0.877 |
OEOE_0906 | OEOE_0909 | OEOE_0906 | OEOE_0909 | Predicted GTPase. | NAD metabolism hydrolase of HD superfamily. | 0.865 |
OEOE_0906 | OEOE_0911 | OEOE_0906 | OEOE_0911 | Predicted GTPase. | SAM-dependent methyltransferase. | 0.806 |
OEOE_0906 | OEOE_0913 | OEOE_0906 | OEOE_0913 | Predicted GTPase. | Predicted metal-binding, possibly nucleic acid-binding protein. | 0.842 |
OEOE_0906 | OEOE_0914 | OEOE_0906 | OEOE_0914 | Predicted GTPase. | Preprotein translocase subunit YidC. | 0.722 |
OEOE_0906 | OEOE_0915 | OEOE_0906 | OEOE_0915 | Predicted GTPase. | rRNA methylase; Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family. | 0.910 |
OEOE_0906 | nadD | OEOE_0906 | OEOE_0908 | Predicted GTPase. | Nicotinate-nucleotide adenylyltransferase; Catalyzes the reversible adenylation of nicotinate mononucleotide (NaMN) to nicotinic acid adenine dinucleotide (NaAD). | 0.884 |
OEOE_0906 | rsfS | OEOE_0906 | OEOE_0910 | Predicted GTPase. | Iojap family protein; Functions as a ribosomal silencing factor. Interacts with ribosomal protein L14 (rplN), blocking formation of intersubunit bridge B8. Prevents association of the 30S and 50S ribosomal subunits and the formation of functional ribosomes, thus repressing translation. | 0.951 |
OEOE_0906 | tmcAL | OEOE_0906 | OEOE_0912 | Predicted GTPase. | Predicted nucleotidyltransferase; Catalyzes the formation of N(4)-acetylcytidine (ac(4)C) at the wobble position of elongator tRNA(Met), using acetate and ATP as substrates. First activates an acetate ion to form acetyladenylate (Ac- AMP) and then transfers the acetyl group to tRNA to form ac(4)C34. | 0.804 |
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