Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
OEOE_0751 | OEOE_1806 | OEOE_0751 | OEOE_1806 | Putative lysine transport system permease protein; TC 3.A.1.3.-; TC 3.A.1.3.-. | Glutamine transport system permease protein; TC 3.A.1.3.-; TC 3.A.1.3.-. | 0.827 |
OEOE_0751 | argG | OEOE_0751 | OEOE_0939 | Putative lysine transport system permease protein; TC 3.A.1.3.-; TC 3.A.1.3.-. | Argininosuccinate synthase; Belongs to the argininosuccinate synthase family. Type 1 subfamily. | 0.635 |
OEOE_0751 | carA | OEOE_0751 | OEOE_0260 | Putative lysine transport system permease protein; TC 3.A.1.3.-; TC 3.A.1.3.-. | Carbamoyl-phosphate synthase small subunit; Belongs to the CarA family. | 0.435 |
OEOE_0751 | carB | OEOE_0751 | OEOE_0261 | Putative lysine transport system permease protein; TC 3.A.1.3.-; TC 3.A.1.3.-. | Carbamoyl-phosphate synthase large subunit. | 0.447 |
OEOE_1048 | OEOE_1544 | OEOE_1048 | OEOE_1544 | Aspartate racemase; Belongs to the aspartate/glutamate racemases family. | Aspartate kinase; Belongs to the aspartokinase family. | 0.800 |
OEOE_1048 | OEOE_1807 | OEOE_1048 | OEOE_1807 | Aspartate racemase; Belongs to the aspartate/glutamate racemases family. | Asparaginase. | 0.917 |
OEOE_1048 | argG | OEOE_1048 | OEOE_0939 | Aspartate racemase; Belongs to the aspartate/glutamate racemases family. | Argininosuccinate synthase; Belongs to the argininosuccinate synthase family. Type 1 subfamily. | 0.900 |
OEOE_1048 | purA | OEOE_1048 | OEOE_1126 | Aspartate racemase; Belongs to the aspartate/glutamate racemases family. | Adenylosuccinate synthetase; Plays an important role in the de novo pathway of purine nucleotide biosynthesis. Catalyzes the first committed step in the biosynthesis of AMP from IMP; Belongs to the adenylosuccinate synthetase family. | 0.900 |
OEOE_1048 | pyrB | OEOE_1048 | OEOE_0258 | Aspartate racemase; Belongs to the aspartate/glutamate racemases family. | Aspartate carbamoyltransferase; Belongs to the aspartate/ornithine carbamoyltransferase superfamily. ATCase family. | 0.915 |
OEOE_1544 | OEOE_1048 | OEOE_1544 | OEOE_1048 | Aspartate kinase; Belongs to the aspartokinase family. | Aspartate racemase; Belongs to the aspartate/glutamate racemases family. | 0.800 |
OEOE_1544 | OEOE_1807 | OEOE_1544 | OEOE_1807 | Aspartate kinase; Belongs to the aspartokinase family. | Asparaginase. | 0.815 |
OEOE_1544 | argG | OEOE_1544 | OEOE_0939 | Aspartate kinase; Belongs to the aspartokinase family. | Argininosuccinate synthase; Belongs to the argininosuccinate synthase family. Type 1 subfamily. | 0.872 |
OEOE_1544 | purA | OEOE_1544 | OEOE_1126 | Aspartate kinase; Belongs to the aspartokinase family. | Adenylosuccinate synthetase; Plays an important role in the de novo pathway of purine nucleotide biosynthesis. Catalyzes the first committed step in the biosynthesis of AMP from IMP; Belongs to the adenylosuccinate synthetase family. | 0.827 |
OEOE_1544 | pyrB | OEOE_1544 | OEOE_0258 | Aspartate kinase; Belongs to the aspartokinase family. | Aspartate carbamoyltransferase; Belongs to the aspartate/ornithine carbamoyltransferase superfamily. ATCase family. | 0.802 |
OEOE_1806 | OEOE_0751 | OEOE_1806 | OEOE_0751 | Glutamine transport system permease protein; TC 3.A.1.3.-; TC 3.A.1.3.-. | Putative lysine transport system permease protein; TC 3.A.1.3.-; TC 3.A.1.3.-. | 0.827 |
OEOE_1806 | OEOE_1807 | OEOE_1806 | OEOE_1807 | Glutamine transport system permease protein; TC 3.A.1.3.-; TC 3.A.1.3.-. | Asparaginase. | 0.822 |
OEOE_1806 | argG | OEOE_1806 | OEOE_0939 | Glutamine transport system permease protein; TC 3.A.1.3.-; TC 3.A.1.3.-. | Argininosuccinate synthase; Belongs to the argininosuccinate synthase family. Type 1 subfamily. | 0.711 |
OEOE_1806 | carA | OEOE_1806 | OEOE_0260 | Glutamine transport system permease protein; TC 3.A.1.3.-; TC 3.A.1.3.-. | Carbamoyl-phosphate synthase small subunit; Belongs to the CarA family. | 0.506 |
OEOE_1806 | carB | OEOE_1806 | OEOE_0261 | Glutamine transport system permease protein; TC 3.A.1.3.-; TC 3.A.1.3.-. | Carbamoyl-phosphate synthase large subunit. | 0.486 |
OEOE_1807 | OEOE_1048 | OEOE_1807 | OEOE_1048 | Asparaginase. | Aspartate racemase; Belongs to the aspartate/glutamate racemases family. | 0.917 |
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