STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
OEOE_1707Threonine dehydrogenase-like Zn-dependent dehydrogenase. (336 aa)    
Predicted Functional Partners:
OEOE_1705
methylmalonyl-CoA epimerase.
 
  
 0.922
OEOE_1706
Predicted membrane protein.
 
     0.871
OEOE_0394
Threonine dehydrogenase-like Zn-dependent dehydrogenase.
 
    
0.614
OEOE_1708
Branched chain amino acid: 2-keto-4-methylthiobutyrate aminotransferase / fructokinase.
 
  
 0.572
OEOE_1709
Lactate dehydrogenase; Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family.
  
  
 0.416
OEOE_0235
PTS system IIC component, Gat family; TC 4.A.5.
 
    0.408
Your Current Organism:
Oenococcus oeni
NCBI taxonomy Id: 203123
Other names: O. oeni PSU-1, Oenococcus oeni PSU-1, Oenococcus oeni str. PSU-1, Oenococcus oeni strain PSU-1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.