STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Tery_0045PFAM: glycoside hydrolase, family 57; KEGG: ava:Ava_0382 glycoside hydrolase, family 57; Belongs to the glycosyl hydrolase 57 family. (527 aa)    
Predicted Functional Partners:
Tery_4043
PFAM: glycosyl transferase, group 1; KEGG: ana:all2507 probable hexosyltransferase.
 
  
 0.966
glgA
Glycogen/starch synthases, ADP-glucose type; Synthesizes alpha-1,4-glucan chains using ADP-glucose.
 
 
 0.921
Tery_0218
Glycogen/starch/alpha-glucan phosphorylases; Phosphorylase is an important allosteric enzyme in carbohydrate metabolism. Enzymes from different sources differ in their regulatory mechanisms and in their natural substrates. However, all known phosphorylases share catalytic and structural properties.
    
 0.919
Tery_3694
Glycogen/starch/alpha-glucan phosphorylases; Phosphorylase is an important allosteric enzyme in carbohydrate metabolism. Enzymes from different sources differ in their regulatory mechanisms and in their natural substrates. However, all known phosphorylases share catalytic and structural properties.
    
 0.919
Tery_4392
PFAM: alpha amylase, catalytic region; SMART: Alpha amylase, catalytic subdomain; KEGG: ava:Ava_2017 alpha amylase, catalytic region.
     
 0.919
glgB
1,4-alpha-glucan branching enzyme; Catalyzes the formation of the alpha-1,6-glucosidic linkages in glycogen by scission of a 1,4-alpha-linked oligosaccharide from growing alpha-1,4-glucan chains and the subsequent attachment of the oligosaccharide to the alpha-1,6 position; Belongs to the glycosyl hydrolase 13 family. GlgB subfamily.
    
 0.915
Tery_1296
KEGG: ana:alr3871 4-alpha-glucanotransferase; TIGRFAM: 4-alpha-glucanotransferase; PFAM: glycoside hydrolase, family 77.
     
 0.906
Tery_1895
KEGG: syn:slr0237 glycogen operon protein GlgX; TIGRFAM: glycogen debranching enzyme GlgX; PFAM: glycoside hydrolase, family 13-like alpha amylase, catalytic region; SMART: Alpha amylase, catalytic subdomain; Belongs to the glycosyl hydrolase 13 family.
     
 0.900
Tery_3430
KEGG: noc:Noc_1740 glycogen debranching enzyme GlgX; TIGRFAM: glycogen debranching enzyme GlgX; PFAM: glycoside hydrolase, family 13-like alpha amylase, catalytic region; SMART: Alpha amylase, catalytic subdomain; Belongs to the glycosyl hydrolase 13 family.
     
 0.900
Tery_5016
KEGG: syn:slr1857 glycogen operon protein GlgX; TIGRFAM: glycogen debranching enzyme GlgX; PFAM: glycoside hydrolase, family 13-like alpha amylase, catalytic region; SMART: Alpha amylase, catalytic subdomain; Belongs to the glycosyl hydrolase 13 family.
     
 0.900
Your Current Organism:
Trichodesmium erythraeum
NCBI taxonomy Id: 203124
Other names: T. erythraeum IMS101, Trichodesmium erythraeum IMS101, Trichodesmium erythraeum str. IMS101, Trichodesmium erythraeum strain IMS101, Trichodesmium sp. IMS101
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