STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Tery_0309KEGG: cel:F26A1.8 Hypothetical protein F26A1.8. (287 aa)    
Predicted Functional Partners:
Tery_3598
Hypothetical protein; KEGG: hch:HCH_01460 transposase and inactivated derivatives.
  
     0.710
Tery_4299
KEGG: pha:PSHAa0580 hypothetical protein; membrane protein.
  
     0.576
Tery_0274
PFAM: sulfotransferase; KEGG: mmu:215895 similar to sulfotransferase family 3A, member 1.
  
     0.574
Tery_0310
KEGG: ava:Ava_2472 hypothetical protein.
       0.485
Tery_0662
PFAM: adenylyl cyclase class-3/4/guanylyl cyclase response regulator receiveR ATP-binding region, ATPase-like histidine kinase, HAMP region histidine kinase A-like Cache; KEGG: ava:Ava_2148 multi-sensor hybrid histidine kinase.
  
     0.473
pheT
KEGG: ava:Ava_2221 phenylalanyl-tRNA synthetase beta subunit; TIGRFAM: phenylalanyl-tRNA synthetase, beta subunit.
     
 0.450
Tery_0661
PFAM: adenylyl cyclase class-3/4/guanylyl cyclase response regulator receiveR ATP-binding region, ATPase-like histidine kinase, HAMP region histidine kinase A-like; KEGG: ava:Ava_2148 multi-sensor hybrid histidine kinase.
  
     0.429
Tery_0819
KEGG: syn:slr0184 hypothetical protein.
  
     0.429
Tery_2729
PFAM: adenylyl cyclase class-3/4/guanylyl cyclase response regulator receiveR ATP-binding region, ATPase-like histidine kinase, HAMP region histidine kinase A-like; KEGG: ava:Ava_2148 multi-sensor hybrid histidine kinase.
 
    0.402
Your Current Organism:
Trichodesmium erythraeum
NCBI taxonomy Id: 203124
Other names: T. erythraeum IMS101, Trichodesmium erythraeum IMS101, Trichodesmium erythraeum str. IMS101, Trichodesmium erythraeum strain IMS101, Trichodesmium sp. IMS101
Server load: low (26%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.