node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
Tery_0012 | Tery_0483 | Tery_0012 | Tery_0483 | Helicase-like; KEGG: ava:Ava_C0236 helicase-like. | TIGRFAM: ribonuclease, Rne/Rng family; PFAM: RNA binding S1; KEGG: ana:alr4331 ribonuclease E. | 0.770 |
Tery_0012 | infB | Tery_0012 | Tery_3976 | Helicase-like; KEGG: ava:Ava_C0236 helicase-like. | Bacterial translation initiation factor 2 (bIF-2); One of the essential components for the initiation of protein synthesis. Protects formylmethionyl-tRNA from spontaneous hydrolysis and promotes its binding to the 30S ribosomal subunits. Also involved in the hydrolysis of GTP during the formation of the 70S ribosomal complex; Belongs to the TRAFAC class translation factor GTPase superfamily. Classic translation factor GTPase family. IF-2 subfamily. | 0.428 |
Tery_0012 | pnp | Tery_0012 | Tery_1541 | Helicase-like; KEGG: ava:Ava_C0236 helicase-like. | Polyribonucleotide nucleotidyltransferase; Involved in mRNA degradation. Catalyzes the phosphorolysis of single-stranded polyribonucleotides processively in the 3'- to 5'- direction. | 0.920 |
Tery_0012 | rplB | Tery_0012 | Tery_3009 | Helicase-like; KEGG: ava:Ava_C0236 helicase-like. | LSU ribosomal protein L2P; One of the primary rRNA binding proteins. Required for association of the 30S and 50S subunits to form the 70S ribosome, for tRNA binding and peptide bond formation. It has been suggested to have peptidyltransferase activity; this is somewhat controversial. Makes several contacts with the 16S rRNA in the 70S ribosome. Belongs to the universal ribosomal protein uL2 family. | 0.737 |
Tery_0012 | rplC | Tery_0012 | Tery_3012 | Helicase-like; KEGG: ava:Ava_C0236 helicase-like. | LSU ribosomal protein L3P; One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit; Belongs to the universal ribosomal protein uL3 family. | 0.899 |
Tery_0012 | rplD | Tery_0012 | Tery_3011 | Helicase-like; KEGG: ava:Ava_C0236 helicase-like. | LSU ribosomal protein L4P; One of the primary rRNA binding proteins, this protein initially binds near the 5'-end of the 23S rRNA. It is important during the early stages of 50S assembly. It makes multiple contacts with different domains of the 23S rRNA in the assembled 50S subunit and ribosome. | 0.838 |
Tery_0012 | rpoB | Tery_0012 | Tery_2939 | Helicase-like; KEGG: ava:Ava_C0236 helicase-like. | DNA-directed RNA polymerase, beta subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.606 |
Tery_0012 | rpsD | Tery_0012 | Tery_0324 | Helicase-like; KEGG: ava:Ava_C0236 helicase-like. | SSU ribosomal protein S4P; One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the body of the 30S subunit. | 0.787 |
Tery_0483 | Tery_0012 | Tery_0483 | Tery_0012 | TIGRFAM: ribonuclease, Rne/Rng family; PFAM: RNA binding S1; KEGG: ana:alr4331 ribonuclease E. | Helicase-like; KEGG: ava:Ava_C0236 helicase-like. | 0.770 |
Tery_0483 | Tery_3732 | Tery_0483 | Tery_3732 | TIGRFAM: ribonuclease, Rne/Rng family; PFAM: RNA binding S1; KEGG: ana:alr4331 ribonuclease E. | PFAM: helicase-like DEAD/DEAH box helicase-like; KEGG: ava:Ava_0642 DEAD/DEAH box helicase-like; Belongs to the DEAD box helicase family. | 0.861 |
Tery_0483 | pnp | Tery_0483 | Tery_1541 | TIGRFAM: ribonuclease, Rne/Rng family; PFAM: RNA binding S1; KEGG: ana:alr4331 ribonuclease E. | Polyribonucleotide nucleotidyltransferase; Involved in mRNA degradation. Catalyzes the phosphorolysis of single-stranded polyribonucleotides processively in the 3'- to 5'- direction. | 0.976 |
Tery_3732 | Tery_0483 | Tery_3732 | Tery_0483 | PFAM: helicase-like DEAD/DEAH box helicase-like; KEGG: ava:Ava_0642 DEAD/DEAH box helicase-like; Belongs to the DEAD box helicase family. | TIGRFAM: ribonuclease, Rne/Rng family; PFAM: RNA binding S1; KEGG: ana:alr4331 ribonuclease E. | 0.861 |
Tery_3732 | infB | Tery_3732 | Tery_3976 | PFAM: helicase-like DEAD/DEAH box helicase-like; KEGG: ava:Ava_0642 DEAD/DEAH box helicase-like; Belongs to the DEAD box helicase family. | Bacterial translation initiation factor 2 (bIF-2); One of the essential components for the initiation of protein synthesis. Protects formylmethionyl-tRNA from spontaneous hydrolysis and promotes its binding to the 30S ribosomal subunits. Also involved in the hydrolysis of GTP during the formation of the 70S ribosomal complex; Belongs to the TRAFAC class translation factor GTPase superfamily. Classic translation factor GTPase family. IF-2 subfamily. | 0.428 |
Tery_3732 | pnp | Tery_3732 | Tery_1541 | PFAM: helicase-like DEAD/DEAH box helicase-like; KEGG: ava:Ava_0642 DEAD/DEAH box helicase-like; Belongs to the DEAD box helicase family. | Polyribonucleotide nucleotidyltransferase; Involved in mRNA degradation. Catalyzes the phosphorolysis of single-stranded polyribonucleotides processively in the 3'- to 5'- direction. | 0.958 |
Tery_3732 | rplB | Tery_3732 | Tery_3009 | PFAM: helicase-like DEAD/DEAH box helicase-like; KEGG: ava:Ava_0642 DEAD/DEAH box helicase-like; Belongs to the DEAD box helicase family. | LSU ribosomal protein L2P; One of the primary rRNA binding proteins. Required for association of the 30S and 50S subunits to form the 70S ribosome, for tRNA binding and peptide bond formation. It has been suggested to have peptidyltransferase activity; this is somewhat controversial. Makes several contacts with the 16S rRNA in the 70S ribosome. Belongs to the universal ribosomal protein uL2 family. | 0.737 |
Tery_3732 | rplC | Tery_3732 | Tery_3012 | PFAM: helicase-like DEAD/DEAH box helicase-like; KEGG: ava:Ava_0642 DEAD/DEAH box helicase-like; Belongs to the DEAD box helicase family. | LSU ribosomal protein L3P; One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit; Belongs to the universal ribosomal protein uL3 family. | 0.905 |
Tery_3732 | rplD | Tery_3732 | Tery_3011 | PFAM: helicase-like DEAD/DEAH box helicase-like; KEGG: ava:Ava_0642 DEAD/DEAH box helicase-like; Belongs to the DEAD box helicase family. | LSU ribosomal protein L4P; One of the primary rRNA binding proteins, this protein initially binds near the 5'-end of the 23S rRNA. It is important during the early stages of 50S assembly. It makes multiple contacts with different domains of the 23S rRNA in the assembled 50S subunit and ribosome. | 0.838 |
Tery_3732 | rpoB | Tery_3732 | Tery_2939 | PFAM: helicase-like DEAD/DEAH box helicase-like; KEGG: ava:Ava_0642 DEAD/DEAH box helicase-like; Belongs to the DEAD box helicase family. | DNA-directed RNA polymerase, beta subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.641 |
Tery_3732 | rpsD | Tery_3732 | Tery_0324 | PFAM: helicase-like DEAD/DEAH box helicase-like; KEGG: ava:Ava_0642 DEAD/DEAH box helicase-like; Belongs to the DEAD box helicase family. | SSU ribosomal protein S4P; One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the body of the 30S subunit. | 0.790 |
infB | Tery_0012 | Tery_3976 | Tery_0012 | Bacterial translation initiation factor 2 (bIF-2); One of the essential components for the initiation of protein synthesis. Protects formylmethionyl-tRNA from spontaneous hydrolysis and promotes its binding to the 30S ribosomal subunits. Also involved in the hydrolysis of GTP during the formation of the 70S ribosomal complex; Belongs to the TRAFAC class translation factor GTPase superfamily. Classic translation factor GTPase family. IF-2 subfamily. | Helicase-like; KEGG: ava:Ava_C0236 helicase-like. | 0.428 |