Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 annotation | node2 annotation | score |
Tery_0345 | Tery_1507 | KEGG: ava:Ava_3131 hypothetical protein. | KEGG: ava:Ava_0551 hypothetical protein. | 0.636 |
Tery_0345 | Tery_1531 | KEGG: ava:Ava_3131 hypothetical protein. | Hypothetical protein; KEGG: saa:SAUSA300_0772 clumping factor A. | 0.535 |
Tery_0345 | Tery_2367 | KEGG: ava:Ava_3131 hypothetical protein. | KEGG: ava:Ava_1104 hypothetical protein. | 0.541 |
Tery_0345 | Tery_2368 | KEGG: ava:Ava_3131 hypothetical protein. | PFAM: von Willebrand factor, type A; KEGG: ava:Ava_1103 von Willebrand factor, type A. | 0.456 |
Tery_0345 | Tery_2828 | KEGG: ava:Ava_3131 hypothetical protein. | Uncharacterized protein with protein kinase and helix-hairpin-helix DNA-binding domains-like; KEGG: ana:alr2824 hypothetical protein. | 0.587 |
Tery_0595 | Tery_1507 | KEGG: ava:Ava_0514 hypothetical protein. | KEGG: ava:Ava_0551 hypothetical protein. | 0.733 |
Tery_0595 | Tery_2367 | KEGG: ava:Ava_0514 hypothetical protein. | KEGG: ava:Ava_1104 hypothetical protein. | 0.561 |
Tery_0595 | Tery_2828 | KEGG: ava:Ava_0514 hypothetical protein. | Uncharacterized protein with protein kinase and helix-hairpin-helix DNA-binding domains-like; KEGG: ana:alr2824 hypothetical protein. | 0.580 |
Tery_1341 | Tery_1531 | KEGG: mlo:mlr7554 hypothetical protein. | Hypothetical protein; KEGG: saa:SAUSA300_0772 clumping factor A. | 0.469 |
Tery_1341 | Tery_2367 | KEGG: mlo:mlr7554 hypothetical protein. | KEGG: ava:Ava_1104 hypothetical protein. | 0.558 |
Tery_1341 | Tery_2828 | KEGG: mlo:mlr7554 hypothetical protein. | Uncharacterized protein with protein kinase and helix-hairpin-helix DNA-binding domains-like; KEGG: ana:alr2824 hypothetical protein. | 0.627 |
Tery_1507 | Tery_0345 | KEGG: ava:Ava_0551 hypothetical protein. | KEGG: ava:Ava_3131 hypothetical protein. | 0.636 |
Tery_1507 | Tery_0595 | KEGG: ava:Ava_0551 hypothetical protein. | KEGG: ava:Ava_0514 hypothetical protein. | 0.733 |
Tery_1507 | Tery_1531 | KEGG: ava:Ava_0551 hypothetical protein. | Hypothetical protein; KEGG: saa:SAUSA300_0772 clumping factor A. | 0.568 |
Tery_1507 | Tery_2367 | KEGG: ava:Ava_0551 hypothetical protein. | KEGG: ava:Ava_1104 hypothetical protein. | 0.602 |
Tery_1507 | Tery_2368 | KEGG: ava:Ava_0551 hypothetical protein. | PFAM: von Willebrand factor, type A; KEGG: ava:Ava_1103 von Willebrand factor, type A. | 0.461 |
Tery_1507 | Tery_2828 | KEGG: ava:Ava_0551 hypothetical protein. | Uncharacterized protein with protein kinase and helix-hairpin-helix DNA-binding domains-like; KEGG: ana:alr2824 hypothetical protein. | 0.539 |
Tery_1531 | Tery_0345 | Hypothetical protein; KEGG: saa:SAUSA300_0772 clumping factor A. | KEGG: ava:Ava_3131 hypothetical protein. | 0.535 |
Tery_1531 | Tery_1341 | Hypothetical protein; KEGG: saa:SAUSA300_0772 clumping factor A. | KEGG: mlo:mlr7554 hypothetical protein. | 0.469 |
Tery_1531 | Tery_1507 | Hypothetical protein; KEGG: saa:SAUSA300_0772 clumping factor A. | KEGG: ava:Ava_0551 hypothetical protein. | 0.568 |
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