STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Tery_3192Glycosyl hydrolases 38-like; PFAM: glycoside hydrolase, family 38 glycosyl hydrolases 38-like; KEGG: ava:Ava_4452 glycoside hydrolase, family 38. (1095 aa)    
Predicted Functional Partners:
Tery_4624
Alpha-glucosidase; PFAM: glycoside hydrolase, family 31; KEGG: lac:LBA1812 alpha-glucosidase II; Belongs to the glycosyl hydrolase 31 family.
 
   
 0.510
Tery_2875
PFAM: ROK domain containing protein; KEGG: ava:Ava_2265 ROK.
 
  
 0.506
Tery_4392
PFAM: alpha amylase, catalytic region; SMART: Alpha amylase, catalytic subdomain; KEGG: ava:Ava_2017 alpha amylase, catalytic region.
 
  
 0.501
Tery_1604
PFAM: extracellular solute-binding protein, family 1; KEGG: ana:all1027 putative multiple sugar transport system substrate-binding protein.
 
     0.496
panC/cmk
Cytidylate kinase / pantothenate synthetase; Catalyzes the condensation of pantoate with beta-alanine in an ATP-dependent reaction via a pantoyl-adenylate intermediate. In the C-terminal section; belongs to the cytidylate kinase family. Type 1 subfamily.
  
    0.465
Tery_0214
PFAM: GHMP kinase; KEGG: tko:TK1831 galactokinase.
   
    0.437
Tery_4474
TIGRFAM: N-acetylglucosamine-6-phosphate deacetylase; KEGG: ana:all0988 N-acetyl-glucosamine-6-phosphate deacetylase.
  
     0.420
Tery_4205
PFAM: oxidoreductase-like Oxidoreductase-like; KEGG: ava:Ava_1201 oxidoreductase-like.
  
    0.416
Tery_1943
KEGG: ava:Ava_2768 hypothetical protein.
   
    0.412
Tery_2589
TIGRFAM: glycogen debranching enzyme, putative; PFAM: Amylo-alpha-1,6-glucosidase; KEGG: syf:Synpcc7942_1575 glycogen debranching enzyme.
   
    0.412
Your Current Organism:
Trichodesmium erythraeum
NCBI taxonomy Id: 203124
Other names: T. erythraeum IMS101, Trichodesmium erythraeum IMS101, Trichodesmium erythraeum str. IMS101, Trichodesmium erythraeum strain IMS101, Trichodesmium sp. IMS101
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