STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Tery_3629TIGRFAM: ATPase, P-type (transporting), HAD superfamily, subfamily IC; PFAM: Haloacid dehalogenase-like hydrolase E1-E2 ATPase-associated region; KEGG: tel:tll0153 cation-transporting ATPase E1-E2 family. (831 aa)    
Predicted Functional Partners:
Tery_2045
Putative signal transduction protein with EFhand domain; PFAM: Calcium-binding EF-hand; KEGG: syf:Synpcc7942_0131 cyclic nucleotide-binding domain (cNMP-BD) protein.
  
 
 0.606
Tery_2313
TIGRFAM: RNA methyltransferase, TrmH family, group 3; PFAM: tRNA/rRNA methyltransferase (SpoU) RNA 2-O ribose methyltransferase, substrate binding; KEGG: ava:Ava_4413 RNA methyltransferase TrmH, group 3; Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family.
 
    
 0.575
Tery_0859
PFAM: TrkA-N sodium/hydrogen exchanger; KEGG: ana:alr0252 Na+/H+ antiporter; Belongs to the monovalent cation:proton antiporter 2 (CPA2) transporter (TC 2.A.37) family.
  
 
 0.572
Tery_2353
UspA; PFAM: UspA sodium/hydrogen exchanger; KEGG: ava:Ava_0089 sodium/hydrogen exchanger.
  
 
 0.536
Tery_4447
Multi-sensor hybrid histidine kinase; KEGG: ana:all2875 two-component hybrid sensor and regulator; TIGRFAM: PAS sensor protein; PFAM: CBS domain containing protein response regulator receiveR GAF ATP-binding region, ATPase-like histidine kinase A-like PAS fold-3 PAS fold; SMART: PAS PAC motif.
  
 
 0.501
Tery_2109
PFAM: AMP-dependent synthetase and ligase Thioesterase phosphopantetheine-binding; KEGG: ava:Ava_4108 beta-ketoacyl synthase.
 
 
 0.492
Tery_0488
PFAM: peptidase S8 and S53, subtilisin, kexin, sedolisin Hemolysin-type calcium-binding region; KEGG: ava:Ava_4060 peptidase S8 and S53, subtilisin, kexin, sedolisin; Belongs to the peptidase S8 family.
   
 0.475
Tery_3819
PFAM: beta-ketoacyl synthase acyl transferase region short-chain dehydrogenase/reductase SDR phosphopantetheine-binding Alcohol dehydrogenase, zinc-binding Alcohol dehydrogenase GroES-like Methyltransferase type 11 Methyltransferase type 12; KEGG: ana:alr2680 polyketide synthase.
  
 
 0.467
Tery_4431
FHA domain containing protein; PFAM: Forkhead-associated ABC transporter related ABC-2 type transporter; SMART: ATPase; KEGG: syn:sll0778 putative MDR (multidrug resistance) family ABC transporter.
  
 0.464
Tery_4243
Molecular chaperone-like; KEGG: mfl:Mfl415 hsp70 chaperone; Belongs to the heat shock protein 70 family.
  
 
 0.441
Your Current Organism:
Trichodesmium erythraeum
NCBI taxonomy Id: 203124
Other names: T. erythraeum IMS101, Trichodesmium erythraeum IMS101, Trichodesmium erythraeum str. IMS101, Trichodesmium erythraeum strain IMS101, Trichodesmium sp. IMS101
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