STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
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Textmining
[Homology]
Score
pcyAFerredoxin-dependent bilin reductase; Catalyzes the four-electron reduction of biliverdin IX-alpha (2-electron reduction at both the A and D rings); the reaction proceeds via an isolatable 2-electron intermediate, 181,182-dihydrobiliverdin. Belongs to the HY2 family. (245 aa)    
Predicted Functional Partners:
Tery_0913
PFAM: oxidoreductase-like; KEGG: ava:Ava_0755 homoserine dehydrogenase, NAD-binding.
  
  
 0.980
Tery_0335
PFAM: Haem oxygenase; KEGG: ava:Ava_3767 heme oxygenase.
 
  
 0.947
Tery_5051
PFAM: ferredoxin-dependent bilin reductase; KEGG: gvi:glr1260 15,16-dihydrobiliverdin:ferredoxin oxidoreductase; Belongs to the HY2 family.
     
0.919
Tery_3650
PFAM: Phycobilisome protein; KEGG: tel:tll0957 allophycocyanin alpha subunit.
  
   
 0.868
Tery_0034
KEGG: ana:all4101 hypothetical protein.
  
     0.773
Tery_3619
KEGG: ava:Ava_0477 hypothetical protein.
  
     0.772
Tery_3895
KEGG: ana:alr4660 hypothetical protein.
  
     0.772
Tery_2886
KEGG: ava:Ava_2667 hypothetical protein.
  
     0.771
Tery_0443
KEGG: ana:alr2980 hypothetical protein.
  
     0.769
Tery_0341
KEGG: ava:Ava_0241 hypothetical protein.
  
     0.768
Your Current Organism:
Trichodesmium erythraeum
NCBI taxonomy Id: 203124
Other names: T. erythraeum IMS101, Trichodesmium erythraeum IMS101, Trichodesmium erythraeum str. IMS101, Trichodesmium erythraeum strain IMS101, Trichodesmium sp. IMS101
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