STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Tery_4298Putative sensor protein; KEGG: gvi:gll3192 hypothetical protein. (463 aa)    
Predicted Functional Partners:
Tery_4285
KEGG: cya:CYA_0366 hypothetical protein.
  
     0.773
Tery_0665
Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s); KEGG: ana:alr3170 hypothetical protein; TIGRFAM: PAS sensor protein diguanylate cyclase; PFAM: conserved hypothetical protein EAL PAS fold-3 PAS fold-4 PAS fold; SMART: PAS PAC motif.
 
 
 0.748
Tery_4980
Response regulator receiver modulated diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s); KEGG: ana:all0219 hypothetical protein; TIGRFAM: PAS sensor protein diguanylate cyclase; PFAM: conserved hypothetical protein EAL response regulator receiveR PAS fold-3 PAS fold; SMART: PAS.
 
 
 0.746
Tery_0638
KEGG: ana:alr4309 hypothetical protein.
  
     0.678
Tery_3593
PEP-utilising enzyme, mobile region; PFAM: pyruvate phosphate dikinase, PEP/pyruvate-binding PEP-utilising enzyme, mobile region; KEGG: ana:all2509 similar to phosphoenolpyruvate synthase.
 
     0.673
Tery_0603
KEGG: ava:Ava_2755 hypothetical protein.
  
     0.648
Tery_4300
KEGG: gvi:gsr4132 hypothetical protein.
  
     0.627
Tery_4447
Multi-sensor hybrid histidine kinase; KEGG: ana:all2875 two-component hybrid sensor and regulator; TIGRFAM: PAS sensor protein; PFAM: CBS domain containing protein response regulator receiveR GAF ATP-binding region, ATPase-like histidine kinase A-like PAS fold-3 PAS fold; SMART: PAS PAC motif.
  
 
 0.619
Tery_2499
TIGRFAM: diguanylate cyclase; PFAM: conserved hypothetical protein EAL; KEGG: ana:all4897 hypothetical protein.
 
  
 0.610
Tery_0602
PFAM: ferrochelatase; KEGG: ava:Ava_2754 ferrochelatase; Belongs to the ferrochelatase family.
  
     0.606
Your Current Organism:
Trichodesmium erythraeum
NCBI taxonomy Id: 203124
Other names: T. erythraeum IMS101, Trichodesmium erythraeum IMS101, Trichodesmium erythraeum str. IMS101, Trichodesmium erythraeum strain IMS101, Trichodesmium sp. IMS101
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