STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Tery_4576PFAM: MOSC domain containing protein; KEGG: rpa:RPA4434 MOSC domain. (267 aa)    
Predicted Functional Partners:
Tery_4014
Hypothetical protein; KEGG: mmu:15930 indoleamine-pyrrole 2,3 dioxygenase.
  
 
 0.822
Tery_3476
KEGG: nmu:Nmul_A1721 hypothetical protein.
  
     0.580
Tery_4987
KEGG: syf:Synpcc7942_1215 acyl-CoA dehydrogenase family protein-like.
  
     0.496
Tery_0337
KEGG: ava:Ava_A0007 hypothetical protein.
  
     0.495
Tery_0492
KEGG: bfs:BF1471 hypothetical protein.
  
     0.438
Tery_1237
Hypothetical protein; KEGG: cfa:485793 similar to Heat shock 70 kDa protein 12B.
  
     0.432
Tery_4936
PFAM: Protein-arginine deiminase-like; KEGG: cfa:606921 similar to Protein-arginine deiminase type IV (Peptidylarginine deiminase IV) (HL-60 PAD).
  
     0.430
Tery_4958
PFAM: TPR repeat; SMART: Sel1-like Tetratricopeptide region; KEGG: ana:alr0963 unknown protein.
  
     0.407
Your Current Organism:
Trichodesmium erythraeum
NCBI taxonomy Id: 203124
Other names: T. erythraeum IMS101, Trichodesmium erythraeum IMS101, Trichodesmium erythraeum str. IMS101, Trichodesmium erythraeum strain IMS101, Trichodesmium sp. IMS101
Server load: low (22%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.