STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
dppBDipeptide transport system permease protein. (332 aa)    
Predicted Functional Partners:
dppC
Dipeptide transport system permease protein.
 
 0.999
dppD
Dipeptide transport system ATP-binding protein; Belongs to the ABC transporter superfamily.
 
 0.999
dppA2
Dipeptide ABC transporter substrate-binding protein.
 
 0.985
dppA1
Dipeptide ABC transporter substrate-binding protein.
  
 0.865
TWT_139
ABC transporter ATP-binding protein.
       0.557
TWT_408
ABC transporter ATP-binding protein.
  
  
 0.512
guaA
GMP synthase; Catalyzes the synthesis of GMP from XMP.
  
  
 0.429
Your Current Organism:
Tropheryma whipplei
NCBI taxonomy Id: 203267
Other names: T. whipplei str. Twist, Tropheryma whipplei Twist, Tropheryma whipplei str. Twist, Tropheryma whipplei strain Twist
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.