STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AIY16224.1Alcohol dehydrogenase. (425 aa)    
Predicted Functional Partners:
AIY18881.1
Alcohol dehydrogenase.
 
 0.940
AIY16223.1
MutT-like domain protein; Belongs to the Nudix hydrolase family.
  
    0.797
AIY19291.1
Alcohol dehydrogenase.
  
     0.745
macA
Alcohol dehydrogenase.
  
     0.736
AIY18799.1
Short chain dehydrogenase; Belongs to the short-chain dehydrogenases/reductases (SDR) family.
    
 0.701
gapA
NAD-dependent glyceraldehyde-3-phosphate dehydrogenase; Belongs to the glyceraldehyde-3-phosphate dehydrogenase family.
 
  
 0.660
AIY16222.1
Putative oxidoreductase.
  
  
 0.578
AJR18128.1
Hypothetical protein.
  
    0.541
AIY16225.1
Methyltransferase.
       0.524
AIY16227.1
Hypothetical protein.
       0.524
Your Current Organism:
Pimelobacter simplex
NCBI taxonomy Id: 2045
Other names: ATCC 6946, Arthrobacter simplex, CCUG 23611, CIP 82.106, Corynebacterium simplex, DSM 20130, HAMBI 90, IFO 12069, KCTC 9106, LMG 16261, LMG:16261, NBRC 12069, NCIB 8929, NCIB:8929, Nocardioides simplex, P. simplex
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