STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AIY16645.1Aldehyde dehydrogenase; Belongs to the aldehyde dehydrogenase family. (498 aa)    
Predicted Functional Partners:
AIY18547.1
Aldehyde dehydrogenase.
 
      0.887
AIY16643.1
Thymidylate kinase.
   
 
 0.735
AJR18213.1
Hypothetical protein.
  
    0.716
AIY16644.1
Hypothetical protein.
       0.709
AIY16642.2
Cys-tRNA(Pro) deacylase YbaK.
 
    0.617
AIY16641.1
Thioredoxin reductase.
   
   0.451
AJR18600.1
Putative RuBisCo-expression protein CbbX.
   
 0.442
AIY18304.2
TPR-repeat-containing protein.
  
 0.434
AIY18898.1
Putative sulfotransferase protein.
  
 0.434
AJR18730.1
Sulfotransferase.
  
 0.434
Your Current Organism:
Pimelobacter simplex
NCBI taxonomy Id: 2045
Other names: ATCC 6946, Arthrobacter simplex, CCUG 23611, CIP 82.106, Corynebacterium simplex, DSM 20130, HAMBI 90, IFO 12069, KCTC 9106, LMG 16261, LMG:16261, NBRC 12069, NCIB 8929, NCIB:8929, Nocardioides simplex, P. simplex
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