STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AIY18139.1Aldehyde dehydrogenase; Belongs to the aldehyde dehydrogenase family. (470 aa)    
Predicted Functional Partners:
AIY18547.1
Aldehyde dehydrogenase.
    
0.913
AIY18140.1
NAD-specific glutamate dehydrogenase; Belongs to the Glu/Leu/Phe/Val dehydrogenases family.
  
 
 0.817
AIY18141.1
Acetolactate synthase large subunit; Belongs to the TPP enzyme family.
 
 
 0.814
fadH_2
Short chain dehydrogenase.
  
   0.814
AIY18144.1
Acyl-CoA dehydrogenase, short-chain specific.
 
 
 0.811
AJR18551.1
Sarcosine oxidase beta subunit.
  
  
 0.791
AIY18143.1
Acetyl-CoA synthetase (ADP-forming) alpha and beta chains, putative.
     
 0.786
AJR18552.1
Permease of the drug/metabolite transporter (DMT) superfamily.
     
 0.781
AIY20010.2
Putrescine transport ATP-binding protein PotA; Belongs to the ABC transporter superfamily.
  
  
 0.693
AIY18145.1
Spermidine Putrescine ABC transporter permease component potC.
  
  
 0.660
Your Current Organism:
Pimelobacter simplex
NCBI taxonomy Id: 2045
Other names: ATCC 6946, Arthrobacter simplex, CCUG 23611, CIP 82.106, Corynebacterium simplex, DSM 20130, HAMBI 90, IFO 12069, KCTC 9106, LMG 16261, LMG:16261, NBRC 12069, NCIB 8929, NCIB:8929, Nocardioides simplex, P. simplex
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