STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AJR18723.1Ribose ABC transport system, ATP-binding protein RbsA. (522 aa)    
Predicted Functional Partners:
AJR18722.1
Nucleoside ABC transporter, permease protein 1; Belongs to the binding-protein-dependent transport system permease family.
  
 0.972
AIY18956.1
Ribose ABC transport system, permease protein RbsC; Belongs to the binding-protein-dependent transport system permease family.
  
 0.970
AIY18957.1
Hypothetical protein.
 
  
 0.964
AIY16002.1
Nucleoside ABC transporter, permease protein 1; Belongs to the binding-protein-dependent transport system permease family.
  
 0.880
AJR18209.1
Nucleoside ABC transporter, permease protein 1; Belongs to the binding-protein-dependent transport system permease family.
  
 0.878
AIY20173.2
Nucleoside ABC transporter, permease protein 1; Belongs to the binding-protein-dependent transport system permease family.
  
 0.877
AIY16618.1
Nucleoside ABC transporter, permease protein 2; Belongs to the binding-protein-dependent transport system permease family.
  
 0.875
AIY16003.1
Nucleoside ABC transporter, permease protein 2; Belongs to the binding-protein-dependent transport system permease family.
  
 0.873
AIY19199.1
Nucleoside ABC transporter, permease protein 2; Belongs to the binding-protein-dependent transport system permease family.
  
 0.873
AJR18078.1
Nucleoside ABC transporter, periplasmic nucleoside-binding protein.
  
 0.865
Your Current Organism:
Pimelobacter simplex
NCBI taxonomy Id: 2045
Other names: ATCC 6946, Arthrobacter simplex, CCUG 23611, CIP 82.106, Corynebacterium simplex, DSM 20130, HAMBI 90, IFO 12069, KCTC 9106, LMG 16261, LMG:16261, NBRC 12069, NCIB 8929, NCIB:8929, Nocardioides simplex, P. simplex
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