Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
ABF39843.1 | ABF39844.1 | Acid345_0838 | Acid345_0839 | Serine phosphatase. | Glyoxalase/bleomycin resistance protein/dioxygenase. | 0.494 |
ABF39843.1 | ABF40638.1 | Acid345_0838 | Acid345_1636 | Serine phosphatase. | Flagellar motor switch protein FliM. | 0.449 |
ABF39843.1 | ABF40653.1 | Acid345_0838 | Acid345_1651 | Serine phosphatase. | Flagellar motor switch protein FliG. | 0.452 |
ABF39843.1 | ABF40979.1 | Acid345_0838 | Acid345_1978 | Serine phosphatase. | Anti-sigma-factor antagonist. | 0.582 |
ABF39843.1 | ABF41413.1 | Acid345_0838 | Acid345_2412 | Serine phosphatase. | Histidine kinase. | 0.658 |
ABF39843.1 | ABF41516.1 | Acid345_0838 | Acid345_2515 | Serine phosphatase. | Putative anti-sigma regulatory factor, serine/threonine protein kinase. | 0.491 |
ABF39843.1 | ABF41517.1 | Acid345_0838 | Acid345_2516 | Serine phosphatase. | Anti-sigma-factor antagonist. | 0.482 |
ABF39843.1 | ABF41928.1 | Acid345_0838 | Acid345_2927 | Serine phosphatase. | Hypothetical protein. | 0.562 |
ABF39843.1 | ABF43059.1 | Acid345_0838 | Acid345_4059 | Serine phosphatase. | PAS/PAC sensor hybrid histidine kinase. | 0.671 |
ABF39843.1 | ABF43066.1 | Acid345_0838 | Acid345_4066 | Serine phosphatase. | Response regulator receiver protein. | 0.469 |
ABF39844.1 | ABF39843.1 | Acid345_0839 | Acid345_0838 | Glyoxalase/bleomycin resistance protein/dioxygenase. | Serine phosphatase. | 0.494 |
ABF40638.1 | ABF39843.1 | Acid345_1636 | Acid345_0838 | Flagellar motor switch protein FliM. | Serine phosphatase. | 0.449 |
ABF40638.1 | ABF40653.1 | Acid345_1636 | Acid345_1651 | Flagellar motor switch protein FliM. | Flagellar motor switch protein FliG. | 0.999 |
ABF40638.1 | ABF41413.1 | Acid345_1636 | Acid345_2412 | Flagellar motor switch protein FliM. | Histidine kinase. | 0.840 |
ABF40638.1 | ABF41516.1 | Acid345_1636 | Acid345_2515 | Flagellar motor switch protein FliM. | Putative anti-sigma regulatory factor, serine/threonine protein kinase. | 0.439 |
ABF40638.1 | ABF41928.1 | Acid345_1636 | Acid345_2927 | Flagellar motor switch protein FliM. | Hypothetical protein. | 0.975 |
ABF40638.1 | ABF43059.1 | Acid345_1636 | Acid345_4059 | Flagellar motor switch protein FliM. | PAS/PAC sensor hybrid histidine kinase. | 0.855 |
ABF40638.1 | ABF43066.1 | Acid345_1636 | Acid345_4066 | Flagellar motor switch protein FliM. | Response regulator receiver protein. | 0.439 |
ABF40653.1 | ABF39843.1 | Acid345_1651 | Acid345_0838 | Flagellar motor switch protein FliG. | Serine phosphatase. | 0.452 |
ABF40653.1 | ABF40638.1 | Acid345_1651 | Acid345_1636 | Flagellar motor switch protein FliG. | Flagellar motor switch protein FliM. | 0.999 |
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