Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
ABF39961.1 | ABF39962.1 | Acid345_0958 | Acid345_0959 | Hypothetical protein. | Serine phosphatase. | 0.773 |
ABF39962.1 | ABF39961.1 | Acid345_0959 | Acid345_0958 | Serine phosphatase. | Hypothetical protein. | 0.773 |
ABF39962.1 | ABF40766.1 | Acid345_0959 | Acid345_1765 | Serine phosphatase. | Anti-sigma-factor antagonist. | 0.819 |
ABF39962.1 | ABF40979.1 | Acid345_0959 | Acid345_1978 | Serine phosphatase. | Anti-sigma-factor antagonist. | 0.772 |
ABF39962.1 | ABF41318.1 | Acid345_0959 | Acid345_2317 | Serine phosphatase. | Putative anti-sigma regulatory factor, serine/threonine protein kinase. | 0.838 |
ABF39962.1 | ABF41413.1 | Acid345_0959 | Acid345_2412 | Serine phosphatase. | Histidine kinase. | 0.697 |
ABF39962.1 | ABF41516.1 | Acid345_0959 | Acid345_2515 | Serine phosphatase. | Putative anti-sigma regulatory factor, serine/threonine protein kinase. | 0.828 |
ABF39962.1 | ABF41517.1 | Acid345_0959 | Acid345_2516 | Serine phosphatase. | Anti-sigma-factor antagonist. | 0.836 |
ABF39962.1 | ABF41986.1 | Acid345_0959 | Acid345_2985 | Serine phosphatase. | Putative anti-sigma regulatory factor, serine/threonine protein kinase. | 0.575 |
ABF39962.1 | ABF43059.1 | Acid345_0959 | Acid345_4059 | Serine phosphatase. | PAS/PAC sensor hybrid histidine kinase. | 0.671 |
ABF39962.1 | ABF43611.1 | Acid345_0959 | Acid345_4611 | Serine phosphatase. | Anti-sigma-factor antagonist. | 0.609 |
ABF40766.1 | ABF39962.1 | Acid345_1765 | Acid345_0959 | Anti-sigma-factor antagonist. | Serine phosphatase. | 0.819 |
ABF40766.1 | ABF41318.1 | Acid345_1765 | Acid345_2317 | Anti-sigma-factor antagonist. | Putative anti-sigma regulatory factor, serine/threonine protein kinase. | 0.866 |
ABF40766.1 | ABF41413.1 | Acid345_1765 | Acid345_2412 | Anti-sigma-factor antagonist. | Histidine kinase. | 0.816 |
ABF40766.1 | ABF41516.1 | Acid345_1765 | Acid345_2515 | Anti-sigma-factor antagonist. | Putative anti-sigma regulatory factor, serine/threonine protein kinase. | 0.871 |
ABF40766.1 | ABF41986.1 | Acid345_1765 | Acid345_2985 | Anti-sigma-factor antagonist. | Putative anti-sigma regulatory factor, serine/threonine protein kinase. | 0.624 |
ABF40766.1 | ABF43059.1 | Acid345_1765 | Acid345_4059 | Anti-sigma-factor antagonist. | PAS/PAC sensor hybrid histidine kinase. | 0.816 |
ABF40766.1 | ABF43611.1 | Acid345_1765 | Acid345_4611 | Anti-sigma-factor antagonist. | Anti-sigma-factor antagonist. | 0.650 |
ABF40979.1 | ABF39962.1 | Acid345_1978 | Acid345_0959 | Anti-sigma-factor antagonist. | Serine phosphatase. | 0.772 |
ABF40979.1 | ABF41318.1 | Acid345_1978 | Acid345_2317 | Anti-sigma-factor antagonist. | Putative anti-sigma regulatory factor, serine/threonine protein kinase. | 0.808 |
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