Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
ABF39395.1 | nadK | Acid345_0390 | Acid345_1046 | Type I phosphodiesterase/nucleotide pyrophosphatase. | NAD(+) kinase; Involved in the regulation of the intracellular balance of NAD and NADP, and is a key enzyme in the biosynthesis of NADP. Catalyzes specifically the phosphorylation on 2'-hydroxyl of the adenosine moiety of NAD to yield NADP. | 0.507 |
ABF40048.1 | ffh | Acid345_1045 | Acid345_3035 | Hemolysin A. | Signal recognition particle subunit FFH/SRP54 (srp54); Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Binds to the hydrophobic signal sequence of the ribosome-nascent chain (RNC) as it emerges from the ribosomes. The SRP-RNC complex is then targeted to the cytoplasmic membrane where it interacts with the SRP receptor FtsY. Belongs to the GTP-binding SRP family. SRP54 subfamily. | 0.432 |
ABF40048.1 | nadK | Acid345_1045 | Acid345_1046 | Hemolysin A. | NAD(+) kinase; Involved in the regulation of the intracellular balance of NAD and NADP, and is a key enzyme in the biosynthesis of NADP. Catalyzes specifically the phosphorylation on 2'-hydroxyl of the adenosine moiety of NAD to yield NADP. | 0.903 |
ABF41186.1 | ABF42224.1 | Acid345_2185 | Acid345_3223 | MazG family protein. | Pyridine nucleotide-disulfide oxidoreductase. | 0.909 |
ABF41186.1 | ABF43185.1 | Acid345_2185 | Acid345_4185 | MazG family protein. | NAD(P) transhydrogenase, beta subunit; The transhydrogenation between NADH and NADP is coupled to respiration and ATP hydrolysis and functions as a proton pump across the membrane; Belongs to the PNT beta subunit family. | 0.903 |
ABF41186.1 | ABF43186.1 | Acid345_2185 | Acid345_4186 | MazG family protein. | Nicotinamide nucleotide transhydrogenase, subunit alpha. | 0.900 |
ABF41186.1 | ABF43187.1 | Acid345_2185 | Acid345_4187 | MazG family protein. | NAD(P)(+) transhydrogenase (AB-specific). | 0.900 |
ABF41186.1 | nadD | Acid345_2185 | Acid345_0021 | MazG family protein. | Nicotinate-nucleotide adenylyltransferase; Catalyzes the reversible adenylation of nicotinate mononucleotide (NaMN) to nicotinic acid adenine dinucleotide (NaAD). | 0.905 |
ABF41186.1 | nadE | Acid345_2185 | Acid345_2524 | MazG family protein. | NH(3)-dependent NAD(+) synthetase; Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses L-glutamine as a nitrogen source. | 0.900 |
ABF41186.1 | nadK | Acid345_2185 | Acid345_1046 | MazG family protein. | NAD(+) kinase; Involved in the regulation of the intracellular balance of NAD and NADP, and is a key enzyme in the biosynthesis of NADP. Catalyzes specifically the phosphorylation on 2'-hydroxyl of the adenosine moiety of NAD to yield NADP. | 0.903 |
ABF42224.1 | ABF41186.1 | Acid345_3223 | Acid345_2185 | Pyridine nucleotide-disulfide oxidoreductase. | MazG family protein. | 0.909 |
ABF42224.1 | ABF43185.1 | Acid345_3223 | Acid345_4185 | Pyridine nucleotide-disulfide oxidoreductase. | NAD(P) transhydrogenase, beta subunit; The transhydrogenation between NADH and NADP is coupled to respiration and ATP hydrolysis and functions as a proton pump across the membrane; Belongs to the PNT beta subunit family. | 0.910 |
ABF42224.1 | ABF43186.1 | Acid345_3223 | Acid345_4186 | Pyridine nucleotide-disulfide oxidoreductase. | Nicotinamide nucleotide transhydrogenase, subunit alpha. | 0.907 |
ABF42224.1 | ABF43187.1 | Acid345_3223 | Acid345_4187 | Pyridine nucleotide-disulfide oxidoreductase. | NAD(P)(+) transhydrogenase (AB-specific). | 0.907 |
ABF42224.1 | nadD | Acid345_3223 | Acid345_0021 | Pyridine nucleotide-disulfide oxidoreductase. | Nicotinate-nucleotide adenylyltransferase; Catalyzes the reversible adenylation of nicotinate mononucleotide (NaMN) to nicotinic acid adenine dinucleotide (NaAD). | 0.900 |
ABF42224.1 | nadE | Acid345_3223 | Acid345_2524 | Pyridine nucleotide-disulfide oxidoreductase. | NH(3)-dependent NAD(+) synthetase; Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses L-glutamine as a nitrogen source. | 0.925 |
ABF42224.1 | nadK | Acid345_3223 | Acid345_1046 | Pyridine nucleotide-disulfide oxidoreductase. | NAD(+) kinase; Involved in the regulation of the intracellular balance of NAD and NADP, and is a key enzyme in the biosynthesis of NADP. Catalyzes specifically the phosphorylation on 2'-hydroxyl of the adenosine moiety of NAD to yield NADP. | 0.912 |
ABF43185.1 | ABF41186.1 | Acid345_4185 | Acid345_2185 | NAD(P) transhydrogenase, beta subunit; The transhydrogenation between NADH and NADP is coupled to respiration and ATP hydrolysis and functions as a proton pump across the membrane; Belongs to the PNT beta subunit family. | MazG family protein. | 0.903 |
ABF43185.1 | ABF42224.1 | Acid345_4185 | Acid345_3223 | NAD(P) transhydrogenase, beta subunit; The transhydrogenation between NADH and NADP is coupled to respiration and ATP hydrolysis and functions as a proton pump across the membrane; Belongs to the PNT beta subunit family. | Pyridine nucleotide-disulfide oxidoreductase. | 0.910 |
ABF43185.1 | ABF43186.1 | Acid345_4185 | Acid345_4186 | NAD(P) transhydrogenase, beta subunit; The transhydrogenation between NADH and NADP is coupled to respiration and ATP hydrolysis and functions as a proton pump across the membrane; Belongs to the PNT beta subunit family. | Nicotinamide nucleotide transhydrogenase, subunit alpha. | 0.999 |
page 1 of 4