node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
ABF40469.1 | ABF41894.1 | Acid345_1467 | Acid345_2893 | Ribonuclease, Rne/Rng family. | DEAD/DEAH box helicase-like protein; Belongs to the DEAD box helicase family. | 0.643 |
ABF40469.1 | ABF42221.1 | Acid345_1467 | Acid345_3220 | Ribonuclease, Rne/Rng family. | Hypothetical protein. | 0.643 |
ABF40469.1 | pnp | Acid345_1467 | Acid345_1995 | Ribonuclease, Rne/Rng family. | 3' exoribonuclease; Involved in mRNA degradation. Catalyzes the phosphorolysis of single-stranded polyribonucleotides processively in the 3'- to 5'- direction. | 0.925 |
ABF40469.1 | rho | Acid345_1467 | Acid345_3229 | Ribonuclease, Rne/Rng family. | Transcription termination factor Rho; Facilitates transcription termination by a mechanism that involves Rho binding to the nascent RNA, activation of Rho's RNA- dependent ATPase activity, and release of the mRNA from the DNA template. | 0.497 |
ABF40469.1 | secY | Acid345_1467 | Acid345_1246 | Ribonuclease, Rne/Rng family. | Protein translocase subunit secY/sec61 alpha; The central subunit of the protein translocation channel SecYEG. Consists of two halves formed by TMs 1-5 and 6-10. These two domains form a lateral gate at the front which open onto the bilayer between TMs 2 and 7, and are clamped together by SecE at the back. The channel is closed by both a pore ring composed of hydrophobic SecY resides and a short helix (helix 2A) on the extracellular side of the membrane which forms a plug. The plug probably moves laterally to allow the channel to open. The ring and the pore may move independently. | 0.406 |
ABF41894.1 | ABF40469.1 | Acid345_2893 | Acid345_1467 | DEAD/DEAH box helicase-like protein; Belongs to the DEAD box helicase family. | Ribonuclease, Rne/Rng family. | 0.643 |
ABF41894.1 | pnp | Acid345_2893 | Acid345_1995 | DEAD/DEAH box helicase-like protein; Belongs to the DEAD box helicase family. | 3' exoribonuclease; Involved in mRNA degradation. Catalyzes the phosphorolysis of single-stranded polyribonucleotides processively in the 3'- to 5'- direction. | 0.922 |
ABF41894.1 | rho | Acid345_2893 | Acid345_3229 | DEAD/DEAH box helicase-like protein; Belongs to the DEAD box helicase family. | Transcription termination factor Rho; Facilitates transcription termination by a mechanism that involves Rho binding to the nascent RNA, activation of Rho's RNA- dependent ATPase activity, and release of the mRNA from the DNA template. | 0.441 |
ABF41894.1 | rplT | Acid345_2893 | Acid345_0715 | DEAD/DEAH box helicase-like protein; Belongs to the DEAD box helicase family. | LSU ribosomal protein L20P; Binds directly to 23S ribosomal RNA and is necessary for the in vitro assembly process of the 50S ribosomal subunit. It is not involved in the protein synthesizing functions of that subunit. | 0.477 |
ABF41894.1 | rpoB | Acid345_2893 | Acid345_4676 | DEAD/DEAH box helicase-like protein; Belongs to the DEAD box helicase family. | DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.793 |
ABF42221.1 | ABF40469.1 | Acid345_3220 | Acid345_1467 | Hypothetical protein. | Ribonuclease, Rne/Rng family. | 0.643 |
ABF42221.1 | pnp | Acid345_3220 | Acid345_1995 | Hypothetical protein. | 3' exoribonuclease; Involved in mRNA degradation. Catalyzes the phosphorolysis of single-stranded polyribonucleotides processively in the 3'- to 5'- direction. | 0.922 |
ABF42221.1 | rho | Acid345_3220 | Acid345_3229 | Hypothetical protein. | Transcription termination factor Rho; Facilitates transcription termination by a mechanism that involves Rho binding to the nascent RNA, activation of Rho's RNA- dependent ATPase activity, and release of the mRNA from the DNA template. | 0.441 |
ABF42221.1 | rplT | Acid345_3220 | Acid345_0715 | Hypothetical protein. | LSU ribosomal protein L20P; Binds directly to 23S ribosomal RNA and is necessary for the in vitro assembly process of the 50S ribosomal subunit. It is not involved in the protein synthesizing functions of that subunit. | 0.477 |
ABF42221.1 | rpoB | Acid345_3220 | Acid345_4676 | Hypothetical protein. | DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.793 |
infB | nusA | Acid345_4217 | Acid345_4218 | Bacterial translation initiation factor 2 (bIF-2); One of the essential components for the initiation of protein synthesis. Protects formylmethionyl-tRNA from spontaneous hydrolysis and promotes its binding to the 30S ribosomal subunits. Also involved in the hydrolysis of GTP during the formation of the 70S ribosomal complex; Belongs to the TRAFAC class translation factor GTPase superfamily. Classic translation factor GTPase family. IF-2 subfamily. | NusA antitermination factor; Participates in both transcription termination and antitermination. | 0.962 |
infB | pnp | Acid345_4217 | Acid345_1995 | Bacterial translation initiation factor 2 (bIF-2); One of the essential components for the initiation of protein synthesis. Protects formylmethionyl-tRNA from spontaneous hydrolysis and promotes its binding to the 30S ribosomal subunits. Also involved in the hydrolysis of GTP during the formation of the 70S ribosomal complex; Belongs to the TRAFAC class translation factor GTPase superfamily. Classic translation factor GTPase family. IF-2 subfamily. | 3' exoribonuclease; Involved in mRNA degradation. Catalyzes the phosphorolysis of single-stranded polyribonucleotides processively in the 3'- to 5'- direction. | 0.879 |
infB | rho | Acid345_4217 | Acid345_3229 | Bacterial translation initiation factor 2 (bIF-2); One of the essential components for the initiation of protein synthesis. Protects formylmethionyl-tRNA from spontaneous hydrolysis and promotes its binding to the 30S ribosomal subunits. Also involved in the hydrolysis of GTP during the formation of the 70S ribosomal complex; Belongs to the TRAFAC class translation factor GTPase superfamily. Classic translation factor GTPase family. IF-2 subfamily. | Transcription termination factor Rho; Facilitates transcription termination by a mechanism that involves Rho binding to the nascent RNA, activation of Rho's RNA- dependent ATPase activity, and release of the mRNA from the DNA template. | 0.460 |
infB | rplT | Acid345_4217 | Acid345_0715 | Bacterial translation initiation factor 2 (bIF-2); One of the essential components for the initiation of protein synthesis. Protects formylmethionyl-tRNA from spontaneous hydrolysis and promotes its binding to the 30S ribosomal subunits. Also involved in the hydrolysis of GTP during the formation of the 70S ribosomal complex; Belongs to the TRAFAC class translation factor GTPase superfamily. Classic translation factor GTPase family. IF-2 subfamily. | LSU ribosomal protein L20P; Binds directly to 23S ribosomal RNA and is necessary for the in vitro assembly process of the 50S ribosomal subunit. It is not involved in the protein synthesizing functions of that subunit. | 0.928 |
infB | rpoB | Acid345_4217 | Acid345_4676 | Bacterial translation initiation factor 2 (bIF-2); One of the essential components for the initiation of protein synthesis. Protects formylmethionyl-tRNA from spontaneous hydrolysis and promotes its binding to the 30S ribosomal subunits. Also involved in the hydrolysis of GTP during the formation of the 70S ribosomal complex; Belongs to the TRAFAC class translation factor GTPase superfamily. Classic translation factor GTPase family. IF-2 subfamily. | DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.920 |