STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ABF41396.1Serine/threonine protein kinase with TPR repeats. (736 aa)    
Predicted Functional Partners:
ABF40803.1
Adenylate/guanylate cyclase.
 0.945
ABF40346.1
Adenylate/guanylate cyclase.
 
 
 0.935
ABF42884.1
Adenylate/guanylate cyclase.
 
 
 0.934
ABF42050.1
Adenylate/guanylate cyclase.
 
 
 0.924
ndk
Nucleoside diphosphate kinase; Major role in the synthesis of nucleoside triphosphates other than ATP. The ATP gamma phosphate is transferred to the NDP beta phosphate via a ping-pong mechanism, using a phosphorylated active-site intermediate; Belongs to the NDK family.
  
 0.912
ABF41186.1
MazG family protein.
  
 
  0.911
ABF43085.1
Pyruvate kinase; Belongs to the pyruvate kinase family.
  
  0.909
ABF43669.1
Pyruvate kinase; Belongs to the pyruvate kinase family.
  
  0.909
ABF43743.1
Metallophosphoesterase.
   
  0.908
ABF39180.1
(p)ppGpp synthetase I (GTP pyrophosphokinase), SpoT/RelA; In eubacteria ppGpp (guanosine 3'-diphosphate 5-' diphosphate) is a mediator of the stringent response that coordinates a variety of cellular activities in response to changes in nutritional abundance.
    
  0.901
Your Current Organism:
Koribacter versatilis
NCBI taxonomy Id: 204669
Other names: Acidobacteria bacterium Ellin345, C. Koribacter versatilis Ellin345, Candidatus Koribacter versatilis Ellin345, Koribacter versatilis Ellin345, bacterium Ellin345
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.