STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ABF41414.1Anti-sigma regulatory factor, serine/threonine protein kinase and phosphatase. (342 aa)    
Predicted Functional Partners:
ABF41416.1
Anti-sigma-factor antagonist.
 
 
 0.973
ABF41417.1
Anti-sigma-factor antagonist.
 
 
 0.973
ABF41413.1
Histidine kinase.
 
  
 0.937
ABF41412.1
PAS/PAC sensor hybrid histidine kinase.
 
  
 0.860
ABF43059.1
PAS/PAC sensor hybrid histidine kinase.
  
  
 0.856
ABF41415.1
Putative anti-sigma regulatory factor, serine/threonine protein kinase.
 
    
0.841
ABF41407.1
Gas vesicle K.
       0.655
ABF41408.1
Gas vesicle synthesis GvpLGvpF.
       0.655
ABF41409.1
Gas vesicle protein GVPa.
       0.655
ABF41410.1
Gas vesicle synthesis GvpLGvpF.
       0.655
Your Current Organism:
Koribacter versatilis
NCBI taxonomy Id: 204669
Other names: Acidobacteria bacterium Ellin345, C. Koribacter versatilis Ellin345, Candidatus Koribacter versatilis Ellin345, Koribacter versatilis Ellin345, bacterium Ellin345
Server load: low (30%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.