Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
ABF39470.1 | ABF41579.1 | Acid345_0465 | Acid345_2578 | Beta-ketoacyl synthase. | Serine/threonine protein kinase. | 0.493 |
ABF39470.1 | ABF42117.1 | Acid345_0465 | Acid345_3116 | Beta-ketoacyl synthase. | Serine/threonine protein kinase with TPR repeats. | 0.527 |
ABF39470.1 | rpoB | Acid345_0465 | Acid345_4676 | Beta-ketoacyl synthase. | DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.630 |
ABF40803.1 | ABF42117.1 | Acid345_1802 | Acid345_3116 | Adenylate/guanylate cyclase. | Serine/threonine protein kinase with TPR repeats. | 0.483 |
ABF40803.1 | ABF43329.1 | Acid345_1802 | Acid345_4329 | Adenylate/guanylate cyclase. | FHA domain containing protein. | 0.406 |
ABF41579.1 | ABF39470.1 | Acid345_2578 | Acid345_0465 | Serine/threonine protein kinase. | Beta-ketoacyl synthase. | 0.493 |
ABF41579.1 | ABF42117.1 | Acid345_2578 | Acid345_3116 | Serine/threonine protein kinase. | Serine/threonine protein kinase with TPR repeats. | 0.538 |
ABF41579.1 | ABF43329.1 | Acid345_2578 | Acid345_4329 | Serine/threonine protein kinase. | FHA domain containing protein. | 0.762 |
ABF41579.1 | ABF43330.1 | Acid345_2578 | Acid345_4330 | Serine/threonine protein kinase. | Protein serine/threonine phosphatase. | 0.880 |
ABF41719.1 | ABF42117.1 | Acid345_2718 | Acid345_3116 | Serine phosphatase. | Serine/threonine protein kinase with TPR repeats. | 0.556 |
ABF41719.1 | ABF43330.1 | Acid345_2718 | Acid345_4330 | Serine phosphatase. | Protein serine/threonine phosphatase. | 0.417 |
ABF42115.1 | ABF42116.1 | Acid345_3114 | Acid345_3115 | Amino acid/polyamine/organocation transporter, APC superfamily; 2.A.3. | Hypothetical protein. | 0.554 |
ABF42115.1 | ABF42117.1 | Acid345_3114 | Acid345_3116 | Amino acid/polyamine/organocation transporter, APC superfamily; 2.A.3. | Serine/threonine protein kinase with TPR repeats. | 0.542 |
ABF42116.1 | ABF42115.1 | Acid345_3115 | Acid345_3114 | Hypothetical protein. | Amino acid/polyamine/organocation transporter, APC superfamily; 2.A.3. | 0.554 |
ABF42116.1 | ABF42117.1 | Acid345_3115 | Acid345_3116 | Hypothetical protein. | Serine/threonine protein kinase with TPR repeats. | 0.701 |
ABF42116.1 | uvrC | Acid345_3115 | Acid345_3117 | Hypothetical protein. | Excinuclease ABC subunit C; The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrC both incises the 5' and 3' sides of the lesion. The N-terminal half is responsible for the 3' incision and the C-terminal half is responsible for the 5' incision. | 0.507 |
ABF42117.1 | ABF39470.1 | Acid345_3116 | Acid345_0465 | Serine/threonine protein kinase with TPR repeats. | Beta-ketoacyl synthase. | 0.527 |
ABF42117.1 | ABF40803.1 | Acid345_3116 | Acid345_1802 | Serine/threonine protein kinase with TPR repeats. | Adenylate/guanylate cyclase. | 0.483 |
ABF42117.1 | ABF41579.1 | Acid345_3116 | Acid345_2578 | Serine/threonine protein kinase with TPR repeats. | Serine/threonine protein kinase. | 0.538 |
ABF42117.1 | ABF41719.1 | Acid345_3116 | Acid345_2718 | Serine/threonine protein kinase with TPR repeats. | Serine phosphatase. | 0.556 |
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