Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
ABF41242.1 | ABF42554.1 | Acid345_2241 | Acid345_3553 | AAA ATPase. | Hypothetical protein. | 0.720 |
ABF41242.1 | ABF43033.1 | Acid345_2241 | Acid345_4033 | AAA ATPase. | Threonyl/alanyl tRNA synthetase, SAD. | 0.729 |
ABF41242.1 | alaS | Acid345_2241 | Acid345_3983 | AAA ATPase. | alanyl-tRNA synthetase; Catalyzes the attachment of alanine to tRNA(Ala) in a two- step reaction: alanine is first activated by ATP to form Ala-AMP and then transferred to the acceptor end of tRNA(Ala). Also edits incorrectly charged Ser-tRNA(Ala) and Gly-tRNA(Ala) via its editing domain (By similarity). | 0.762 |
ABF41242.1 | thrS | Acid345_2241 | Acid345_4736 | AAA ATPase. | Ser-tRNA(Thr) hydrolase / threonyl-tRNA synthetase; Catalyzes the attachment of threonine to tRNA(Thr) in a two- step reaction: L-threonine is first activated by ATP to form Thr-AMP and then transferred to the acceptor end of tRNA(Thr). | 0.571 |
ABF42554.1 | ABF41242.1 | Acid345_3553 | Acid345_2241 | Hypothetical protein. | AAA ATPase. | 0.720 |
ABF42554.1 | ABF43033.1 | Acid345_3553 | Acid345_4033 | Hypothetical protein. | Threonyl/alanyl tRNA synthetase, SAD. | 0.958 |
ABF42554.1 | alaS | Acid345_3553 | Acid345_3983 | Hypothetical protein. | alanyl-tRNA synthetase; Catalyzes the attachment of alanine to tRNA(Ala) in a two- step reaction: alanine is first activated by ATP to form Ala-AMP and then transferred to the acceptor end of tRNA(Ala). Also edits incorrectly charged Ser-tRNA(Ala) and Gly-tRNA(Ala) via its editing domain (By similarity). | 0.958 |
ABF42856.1 | ABF43033.1 | Acid345_3856 | Acid345_4033 | Serine peptidase; MEROPS family S26A; Belongs to the peptidase S26 family. | Threonyl/alanyl tRNA synthetase, SAD. | 0.815 |
ABF42856.1 | alaS | Acid345_3856 | Acid345_3983 | Serine peptidase; MEROPS family S26A; Belongs to the peptidase S26 family. | alanyl-tRNA synthetase; Catalyzes the attachment of alanine to tRNA(Ala) in a two- step reaction: alanine is first activated by ATP to form Ala-AMP and then transferred to the acceptor end of tRNA(Ala). Also edits incorrectly charged Ser-tRNA(Ala) and Gly-tRNA(Ala) via its editing domain (By similarity). | 0.815 |
ABF42856.1 | metG | Acid345_3856 | Acid345_2030 | Serine peptidase; MEROPS family S26A; Belongs to the peptidase S26 family. | methionyl-tRNA synthetase; Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation; Belongs to the class-I aminoacyl-tRNA synthetase family. | 0.449 |
ABF43033.1 | ABF41242.1 | Acid345_4033 | Acid345_2241 | Threonyl/alanyl tRNA synthetase, SAD. | AAA ATPase. | 0.729 |
ABF43033.1 | ABF42554.1 | Acid345_4033 | Acid345_3553 | Threonyl/alanyl tRNA synthetase, SAD. | Hypothetical protein. | 0.958 |
ABF43033.1 | ABF42856.1 | Acid345_4033 | Acid345_3856 | Threonyl/alanyl tRNA synthetase, SAD. | Serine peptidase; MEROPS family S26A; Belongs to the peptidase S26 family. | 0.815 |
ABF43033.1 | alaS | Acid345_4033 | Acid345_3983 | Threonyl/alanyl tRNA synthetase, SAD. | alanyl-tRNA synthetase; Catalyzes the attachment of alanine to tRNA(Ala) in a two- step reaction: alanine is first activated by ATP to form Ala-AMP and then transferred to the acceptor end of tRNA(Ala). Also edits incorrectly charged Ser-tRNA(Ala) and Gly-tRNA(Ala) via its editing domain (By similarity). | 0.911 |
ABF43033.1 | aspS | Acid345_4033 | Acid345_1204 | Threonyl/alanyl tRNA synthetase, SAD. | aspartyl-tRNA synthetase; Catalyzes the attachment of L-aspartate to tRNA(Asp) in a two-step reaction: L-aspartate is first activated by ATP to form Asp- AMP and then transferred to the acceptor end of tRNA(Asp). Belongs to the class-II aminoacyl-tRNA synthetase family. Type 1 subfamily. | 0.770 |
ABF43033.1 | glyQ | Acid345_4033 | Acid345_1194 | Threonyl/alanyl tRNA synthetase, SAD. | glycyl-tRNA synthetase alpha chain. | 0.669 |
ABF43033.1 | leuS | Acid345_4033 | Acid345_1328 | Threonyl/alanyl tRNA synthetase, SAD. | leucyl-tRNA synthetase; Belongs to the class-I aminoacyl-tRNA synthetase family. | 0.711 |
ABF43033.1 | metG | Acid345_4033 | Acid345_2030 | Threonyl/alanyl tRNA synthetase, SAD. | methionyl-tRNA synthetase; Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation; Belongs to the class-I aminoacyl-tRNA synthetase family. | 0.894 |
ABF43033.1 | thrS | Acid345_4033 | Acid345_4736 | Threonyl/alanyl tRNA synthetase, SAD. | Ser-tRNA(Thr) hydrolase / threonyl-tRNA synthetase; Catalyzes the attachment of threonine to tRNA(Thr) in a two- step reaction: L-threonine is first activated by ATP to form Thr-AMP and then transferred to the acceptor end of tRNA(Thr). | 0.638 |
ABF43033.1 | valS | Acid345_4033 | Acid345_0132 | Threonyl/alanyl tRNA synthetase, SAD. | valyl-tRNA synthetase; Catalyzes the attachment of valine to tRNA(Val). As ValRS can inadvertently accommodate and process structurally similar amino acids such as threonine, to avoid such errors, it has a 'posttransfer' editing activity that hydrolyzes mischarged Thr-tRNA(Val) in a tRNA- dependent manner; Belongs to the class-I aminoacyl-tRNA synthetase family. ValS type 1 subfamily. | 0.822 |
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