STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ABF43087.1Serine/threonine protein kinase with TPR repeats. (1110 aa)    
Predicted Functional Partners:
ABF43330.1
Protein serine/threonine phosphatase.
 
 
 0.829
ABF43329.1
FHA domain containing protein.
 
 
   0.720
pfkA-2
6-phosphofructokinase; Catalyzes the phosphorylation of D-fructose 6-phosphate to fructose 1,6-bisphosphate by ATP, the first committing step of glycolysis; Belongs to the phosphofructokinase type A (PFKA) family. Mixed-substrate PFK group III subfamily.
  
    0.638
ABF43085.1
Pyruvate kinase; Belongs to the pyruvate kinase family.
  
    0.631
ABF43083.1
ATP-dependent endonuclease of the OLD family.
       0.628
ABF43084.1
Conserved hypothetical protein 730; Belongs to the LOG family.
       0.628
ABF43088.1
Hypothetical protein.
  
    0.537
ABF43089.1
Hypothetical protein.
       0.490
ABF43082.1
Hypothetical protein.
       0.400
Your Current Organism:
Koribacter versatilis
NCBI taxonomy Id: 204669
Other names: Acidobacteria bacterium Ellin345, C. Koribacter versatilis Ellin345, Candidatus Koribacter versatilis Ellin345, Koribacter versatilis Ellin345, bacterium Ellin345
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.