STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
nrtBNitrate transport permease protein nrtB; Function of homologous gene experimentally demonstrated in an other organism; transporter. (304 aa)    
Predicted Functional Partners:
nasF
Nitrate transporter component; Function of homologous gene experimentally demonstrated in an other organism; transporter.
 
 
 0.998
nrtD
Nitrate transport ATP-binding protein nrtD; Function of homologous gene experimentally demonstrated in an other organism; transporter.
 
 0.996
HEAR0433
Putative nitrate reductase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family. NasA/NapA/NarB subfamily.
 
  
 0.974
narI
Nitrate reductase, gamma subunit; Function of homologous gene experimentally demonstrated in an other organism; enzyme.
     
  0.900
narH
Nitrate reductase, beta subunit; Function of homologous gene experimentally demonstrated in an other organism; enzyme.
     
  0.900
narG
Nitrate reductase, alpha subunit; Function of homologous gene experimentally demonstrated in an other organism; enzyme; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family.
     
  0.900
HEAR3338
ABC transporter, ATP-binding protein; Function of strongly homologous gene; transporter.
 
  
 0.885
HEAR1633
ABC transporter, ATP binding protein, putative taurine ATPase; Function of strongly homologous gene; transporter.
  
 0.800
HEAR0427
Putative response regulator antiterminator; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative regulator.
 
   
 0.724
HEAR2118
Putative 4,5-dihydroxyphthalate decarboxylase (DHP decarboxylase); Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme.
  
  
 0.617
Your Current Organism:
Herminiimonas arsenicoxydans
NCBI taxonomy Id: 204773
Other names: CCM 7303, DSM 17148, H. arsenicoxydans, Herminiimonas arsenicoxydans Muller et al. 2006, LMG 22961, LMG:22961, strain ULPAs1
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