STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
aoxAArsenite oxidase small subunit precursor, Rieske type subunit, twin arginine translocation peptide; Involved in the detoxification of arsenic. Oxidizes As(III)O3(3-) (arsenite) to the somewhat less toxic As(V)O4(3-) (arsenate); Belongs to the AOX family. (173 aa)    
Predicted Functional Partners:
aoxB
Arsenite oxidase large subunit (AOI); Involved in the detoxification of arsenic. Oxidizes As(III)O3(3-) (arsenite) to the somewhat less toxic As(V)O4(3-) (arsenate); Belongs to the prokaryotic molybdopterin-containing oxidoreductase family.
 
 
 0.999
HEAR0357
NADH dehydrogenase (Quinone); Function of strongly homologous gene; enzyme.
   
 
 0.990
petC
Cytochrome c1 precursor; Function of strongly homologous gene; carrier.
  
 0.988
petB
Cytochrome b; Component of the ubiquinol-cytochrome c reductase complex (complex III or cytochrome b-c1 complex), which is a respiratory chain that generates an electrochemical potential coupled to ATP synthesis.
  
 0.988
ctaC
Cytochrome c oxidase, subunit II (Cytochrome aa3 subunit 2); Subunits I and II form the functional core of the enzyme complex. Electrons originating in cytochrome c are transferred via heme a and Cu(A) to the binuclear center formed by heme a3 and Cu(B).
  
 
 0.980
nuoD
NADH-ubiquinone oxidoreductase D subunit (NADH dehydrogenase subunit D); NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient; Belongs to the complex I 49 kDa subunit family.
   
 
 0.960
HEAR0823
Cytochrome c2; Function of homologous gene experimentally demonstrated in an other organism; carrier.
  
 0.958
HEAR1482
Function of homologous gene experimentally demonstrated in an other organism; carrier.
  
 0.958
HEAR2902
Putative peptidase M16; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme.
   
 0.958
HEAR2903
Putative peptidase M16; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme.
   
 0.958
Your Current Organism:
Herminiimonas arsenicoxydans
NCBI taxonomy Id: 204773
Other names: CCM 7303, DSM 17148, H. arsenicoxydans, Herminiimonas arsenicoxydans Muller et al. 2006, LMG 22961, LMG:22961, strain ULPAs1
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