STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
HEAR1121Putative pyridoxal phosphate-dependent aminotransferase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme; Belongs to the DegT/DnrJ/EryC1 family. (412 aa)    
Predicted Functional Partners:
HEAR1126
N-acylneuraminate-9-phosphate synthase; Function of strongly homologous gene; enzyme.
 
  
 0.969
HEAR1124
Putative polysaccharide biosynthesis protein; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme.
 
  
 0.960
epsB
Polysaccharide biosynthesis glycosyltransferase; Function of homologous gene experimentally demonstrated in an other organism; enzyme.
 
  
 0.958
HEAR1123
Glutamate-1-semialdehyde 2,1-aminomutase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme.
 
  
 0.928
HEAR1147
Putative polysaccharide biosynthesis protein CapE-like; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme.
 
 
 0.905
rfbB
dTDP-glucose 4,6 dehydratase; Function of homologous gene experimentally demonstrated in an other organism; enzyme; Belongs to the NAD(P)-dependent epimerase/dehydratase family. dTDP-glucose dehydratase subfamily.
 
  
 0.874
capG
Capsular polysaccharide synthesis enzyme Cap5G; Function of strongly homologous gene; enzyme; Belongs to the UDP-N-acetylglucosamine 2-epimerase family.
  
  
 0.839
HEAR1122
Putative NAD(P)-linked oxidoreductase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme.
 
  
 0.838
HEAR1151
Putative Polysaccharide biosynthesis protein CapD; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme.
 
  
 0.785
HEAR1125
Conserved hypothetical protein, putative SAM-dependent methyltransferases; Homologs of previously reported genes of unknown function.
     
 0.729
Your Current Organism:
Herminiimonas arsenicoxydans
NCBI taxonomy Id: 204773
Other names: CCM 7303, DSM 17148, H. arsenicoxydans, Herminiimonas arsenicoxydans Muller et al. 2006, LMG 22961, LMG:22961, strain ULPAs1
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