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lysS protein (Herminiimonas arsenicoxydans) - STRING interaction network
"lysS" - Lysine--tRNA ligase in Herminiimonas arsenicoxydans
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second shell of interactors
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
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[Homology]
Score
lysSLysine--tRNA ligase; Evidence 2a - Function of homologous gene experimentally demonstrated in an other organism; Product type e - enzyme; Belongs to the class-II aminoacyl-tRNA synthetase family (511 aa)    
Predicted Functional Partners:
argS
Arginine--tRNA ligase; Evidence 3 - Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; Product type pe - putative enzyme (577 aa)
 
 
  0.937
ileS
Isoleucine--tRNA ligase; Catalyzes the attachment of isoleucine to tRNA(Ile). As IleRS can inadvertently accommodate and process structurally similar amino acids such as valine, to avoid such errors it has two additional distinct tRNA(Ile)-dependent editing activities. One activity is designated as ’pretransfer’ editing and involves the hydrolysis of activated Val-AMP. The other activity is designated ’posttransfer’ editing and involves deacylation of mischarged Val-tRNA(Ile); Belongs to the class-I aminoacyl-tRNA synthetase family. IleS type 1 subfamily (959 aa)
   
 
  0.928
guaA
GMP synthase [glutamine-hydrolyzing]; Catalyzes the synthesis of GMP from XMP (539 aa)
     
   
  0.926
pheT
Phenylalanine--tRNA ligase beta subunit; Evidence 2a - Function of homologous gene experimentally demonstrated in an other organism; Product type e - enzyme; Belongs to the phenylalanyl-tRNA synthetase beta subunit family. Type 1 subfamily (809 aa)
 
   
  0.925
thrS
Threonine--tRNA ligase; Catalyzes the attachment of threonine to tRNA(Thr) in a two-step reaction- L-threonine is first activated by ATP to form Thr-AMP and then transferred to the acceptor end of tRNA(Thr). Also edits incorrectly charged L-seryl-tRNA(Thr) (635 aa)
   
 
  0.897
prfB
Peptide chain release factor 2; Peptide chain release factor 2 directs the termination of translation in response to the peptide chain termination codons UGA and UAA (325 aa)
 
 
  0.891
hisS
Histidine--tRNA ligase; Evidence 2a - Function of homologous gene experimentally demonstrated in an other organism; Product type e - enzyme (448 aa)
     
 
  0.875
proS
Proline--tRNA ligase; Catalyzes the attachment of proline to tRNA(Pro) in a two-step reaction- proline is first activated by ATP to form Pro- AMP and then transferred to the acceptor end of tRNA(Pro). As ProRS can inadvertently accommodate and process non-cognate amino acids such as alanine and cysteine, to avoid such errors it has two additional distinct editing activities against alanine. One activity is designated as ’pretransfer’ editing and involves the tRNA(Pro)-independent hydrolysis of activated Ala-AMP. The other activity is designated ’posttransfer’ editing and involves deacy [...] (577 aa)
     
 
  0.862
leuS
Leucine--tRNA ligase; Evidence 2a - Function of homologous gene experimentally demonstrated in an other organism; Product type e - enzyme; Belongs to the class-I aminoacyl-tRNA synthetase family (881 aa)
   
 
  0.860
metG
Methionine--tRNA ligase; Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation (710 aa)
 
  0.848
Your Current Organism:
Herminiimonas arsenicoxydans
NCBI taxonomy Id: 204773
Other names: CCM 7303, DSM 17148, H. arsenicoxydans, Herminiimonas arsenicoxydans, Herminiimonas arsenicoxydans Muller et al. 2006, LMG 22961, strain ULPAs1
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