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xseA protein (Herminiimonas arsenicoxydans) - STRING interaction network
"xseA" - Exodeoxyribonuclease 7 large subunit in Herminiimonas arsenicoxydans
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query proteins and first shell of interactors
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second shell of interactors
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
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[Homology]
Score
xseAExodeoxyribonuclease 7 large subunit; Bidirectionally degrades single-stranded DNA into large acid-insoluble oligonucleotides, which are then degraded further into small acid-soluble oligonucleotides; Belongs to the XseA family (453 aa)    
Predicted Functional Partners:
xseB
Exodeoxyribonuclease 7 small subunit; Bidirectionally degrades single-stranded DNA into large acid-insoluble oligonucleotides, which are then degraded further into small acid-soluble oligonucleotides; Belongs to the XseB family (84 aa)
 
  0.994
ruvA
Holliday junction ATP-dependent DNA helicase RuvA; The RuvA-RuvB complex in the presence of ATP renatures cruciform structure in supercoiled DNA with palindromic sequence, indicating that it may promote strand exchange reactions in homologous recombination. RuvAB is a helicase that mediates the Holliday junction migration by localized denaturation and reannealing. RuvA stimulates, in the presence of DNA, the weak ATPase activity of RuvB (192 aa)
 
   
  0.926
recA
Protein RecA; Can catalyze the hydrolysis of ATP in the presence of single-stranded DNA, the ATP-dependent uptake of single-stranded DNA by duplex DNA, and the ATP-dependent hybridization of homologous single-stranded DNAs. It interacts with LexA causing its activation and leading to its autocatalytic cleavage (367 aa)
         
  0.901
sodB
Superoxide dismutase; Destroys radicals which are normally produced within the cells and which are toxic to biological systems (192 aa)
       
  0.902
radA
DNA repair protein RadA; DNA-dependent ATPase involved in processing of recombination intermediates, plays a role in repairing DNA breaks. Stimulates the branch migration of RecA-mediated strand transfer reactions, allowing the 3’ invading strand to extend heteroduplex DNA faster. Binds ssDNA in the presence of ADP but not other nucleotides, has ATPase activity that is stimulated by ssDNA and various branched DNA structures, but inhibited by SSB. Does not have RecA’s homology-searching function (456 aa)
   
   
  0.880
recQ
ATP-dependent DNA helicase RecQ; Evidence 2a - Function of homologous gene experimentally demonstrated in an other organism; Product type e - enzyme (608 aa)
   
   
  0.860
holB
DNA polymerase III, delta prime subunit; Evidence 2b - Function of strongly homologous gene; Product type e - enzyme (343 aa)
           
  0.847
alkB
Alkylated DNA repair protein AlkB; Evidence 2a - Function of homologous gene experimentally demonstrated in an other organism; Product type e - enzyme (216 aa)
           
  0.805
HEAR2496
Putative permease; Evidence 3 - Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; Product type pt - putative transporter (294 aa)
              0.757
purL
Phosphoribosylformylglycinamidine synthase; Phosphoribosylformylglycinamidine synthase involved in the purines biosynthetic pathway. Catalyzes the ATP-dependent conversion of formylglycinamide ribonucleotide (FGAR) and glutamine to yield formylglycinamidine ribonucleotide (FGAM) and glutamate (1336 aa)
   
   
  0.668
Your Current Organism:
Herminiimonas arsenicoxydans
NCBI taxonomy Id: 204773
Other names: CCM 7303, DSM 17148, H. arsenicoxydans, Herminiimonas arsenicoxydans, Herminiimonas arsenicoxydans Muller et al. 2006, LMG 22961, strain ULPAs1
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