STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
HEAR2518Carboxylate-amine ligase; ATP-dependent carboxylate-amine ligase which exhibits weak glutamate--cysteine ligase activity; Belongs to the glutamate--cysteine ligase type 2 family. YbdK subfamily. (370 aa)    
Predicted Functional Partners:
gshB1
Glutathione synthetase (Glutathione synthase) (GSH synthetase) (GSH-S) (GSHase); Function of homologous gene experimentally demonstrated in an other organism; enzyme; Belongs to the prokaryotic GSH synthase family.
    
 0.927
gshA1
Glutamate--cysteine ligase; Function of strongly homologous gene; enzyme.
  
  
  0.912
gshA2
Gamma-glutamate-cysteine ligase (Gamma-glutamylcysteine synthetase) (Gamma-ECS) (GCS); Function of strongly homologous gene; enzyme; Belongs to the glutamate--cysteine ligase type 1 family. Type 1 subfamily.
     
 0.911
HEAR0614
Gamma-glutamyltranspeptidase; Function of strongly homologous gene; enzyme.
    
 0.906
HEAR2479
Putative gamma-glutamyltranspeptidase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme.
    
 0.906
pepN
Aminopeptidase N (Alpha-aminoacylpeptide hydrolase); Function of homologous gene experimentally demonstrated in an other organism; enzyme.
     
  0.900
pepA
Cytosol aminopeptidase (Leucine aminopeptidase) (LAP) (Leucyl aminopeptidase); Presumably involved in the processing and regular turnover of intracellular proteins. Catalyzes the removal of unsubstituted N- terminal amino acids from various peptides.
     
  0.900
HEAR2517
Putative Na/H+ antiporter; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative transporter.
 
     0.885
HEAR1919
Cystathionine beta-lyase; Function of strongly homologous gene; enzyme.
     
 0.805
gdhA
Glutamate dehydrogenase, NADP-specific (NADP-GDH); Function of homologous gene experimentally demonstrated in an other organism; enzyme; Belongs to the Glu/Leu/Phe/Val dehydrogenases family.
     
  0.800
Your Current Organism:
Herminiimonas arsenicoxydans
NCBI taxonomy Id: 204773
Other names: CCM 7303, DSM 17148, H. arsenicoxydans, Herminiimonas arsenicoxydans Muller et al. 2006, LMG 22961, LMG:22961, strain ULPAs1
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