STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Psyr_0313Zinc-containing alcohol dehydrogenase superfamily. (328 aa)    
Predicted Functional Partners:
Psyr_0635
MaoC-like dehydratase.
 
 0.919
Psyr_4312
Erythronolide synthase.
 
 
 0.712
Psyr_2474
Acyl-CoA dehydrogenase, C-terminal:Acyl-CoA dehydrogenase, central region.
  
 
 0.694
Psyr_2457
Aminoglycoside phosphotransferase.
 
   0.666
Psyr_1794
Amino acid adenylation.
  
 
 0.665
Psyr_1705
Amino acid adenylation.
 
 
 0.619
Psyr_4313
Beta-ketoacyl synthase:Beta-ketoacyl synthase:Phosphopantetheine-binding protein.
 
 
 0.565
Psyr_4314
Beta-ketoacyl synthase:Beta-ketoacyl synthase:Phosphopantetheine-binding protein.
 
 
 0.560
Psyr_0314
Flagellar basal body-associated protein FliL; Controls the rotational direction of flagella during chemotaxis; Belongs to the FliL family.
       0.533
Psyr_1646
[Acyl-carrier-protein] S-malonyltransferase.
 
    
 0.506
Your Current Organism:
Pseudomonas syringae B728a
NCBI taxonomy Id: 205918
Other names: P. syringae pv. syringae B728a, Pseudomonas syringae pv. syringae B728a, Pseudomonas syringae pv. syringae str. B728a, Pseudomonas syringae pv. syringae strain B728a
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