node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
Psyr_0516 | Psyr_0805 | Psyr_0516 | Psyr_0805 | ATP-dependent RNA helicase DbpA; Belongs to the DEAD box helicase family. | Conserved hypothetical protein. | 0.594 |
Psyr_0516 | Psyr_1733 | Psyr_0516 | Psyr_1733 | ATP-dependent RNA helicase DbpA; Belongs to the DEAD box helicase family. | Peptidyl-prolyl cis-trans isomerase, cyclophilin type; PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides; Belongs to the cyclophilin-type PPIase family. | 0.591 |
Psyr_0516 | Psyr_1794 | Psyr_0516 | Psyr_1794 | ATP-dependent RNA helicase DbpA; Belongs to the DEAD box helicase family. | Amino acid adenylation. | 0.598 |
Psyr_0516 | fusA | Psyr_0516 | Psyr_4551 | ATP-dependent RNA helicase DbpA; Belongs to the DEAD box helicase family. | Translation elongation factor 2 (EF-2/EF-G); Catalyzes the GTP-dependent ribosomal translocation step during translation elongation. During this step, the ribosome changes from the pre-translocational (PRE) to the post-translocational (POST) state as the newly formed A-site-bound peptidyl-tRNA and P-site-bound deacylated tRNA move to the P and E sites, respectively. Catalyzes the coordinated movement of the two tRNA molecules, the mRNA and conformational changes in the ribosome; Belongs to the TRAFAC class translation factor GTPase superfamily. Classic translation factor GTPase family. [...] | 0.693 |
Psyr_0516 | nnrD | Psyr_0516 | Psyr_0567 | ATP-dependent RNA helicase DbpA; Belongs to the DEAD box helicase family. | Protein of unknown function UPF0031:YjeF-related protein, N-terminal; Bifunctional enzyme that catalyzes the epimerization of the S- and R-forms of NAD(P)HX and the dehydration of the S-form of NAD(P)HX at the expense of ADP, which is converted to AMP. This allows the repair of both epimers of NAD(P)HX, a damaged form of NAD(P)H that is a result of enzymatic or heat-dependent hydration. Catalyzes the epimerization of the S- and R-forms of NAD(P)HX, a damaged form of NAD(P)H that is a result of enzymatic or heat-dependent hydration. This is a prerequisite for the S-specific NAD(P)H-hyd [...] | 0.680 |
Psyr_0516 | pnp | Psyr_0516 | Psyr_4176 | ATP-dependent RNA helicase DbpA; Belongs to the DEAD box helicase family. | Polyribonucleotide nucleotidyltransferase; Involved in mRNA degradation. Catalyzes the phosphorolysis of single-stranded polyribonucleotides processively in the 3'- to 5'- direction. | 0.685 |
Psyr_0516 | rplC | Psyr_0516 | Psyr_4548 | ATP-dependent RNA helicase DbpA; Belongs to the DEAD box helicase family. | LSU ribosomal protein L3P; One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit. | 0.670 |
Psyr_0516 | rplD | Psyr_0516 | Psyr_4547 | ATP-dependent RNA helicase DbpA; Belongs to the DEAD box helicase family. | LSU ribosomal protein L4P; One of the primary rRNA binding proteins, this protein initially binds near the 5'-end of the 23S rRNA. It is important during the early stages of 50S assembly. It makes multiple contacts with different domains of the 23S rRNA in the assembled 50S subunit and ribosome. | 0.634 |
Psyr_0516 | rplM | Psyr_0516 | Psyr_4120 | ATP-dependent RNA helicase DbpA; Belongs to the DEAD box helicase family. | LSU ribosomal protein L13P; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly. | 0.630 |
Psyr_0516 | rpsD | Psyr_0516 | Psyr_4525 | ATP-dependent RNA helicase DbpA; Belongs to the DEAD box helicase family. | SSU ribosomal protein S4P; One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the body of the 30S subunit. | 0.614 |
Psyr_0805 | Psyr_0516 | Psyr_0805 | Psyr_0516 | Conserved hypothetical protein. | ATP-dependent RNA helicase DbpA; Belongs to the DEAD box helicase family. | 0.594 |
Psyr_0805 | Psyr_1733 | Psyr_0805 | Psyr_1733 | Conserved hypothetical protein. | Peptidyl-prolyl cis-trans isomerase, cyclophilin type; PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides; Belongs to the cyclophilin-type PPIase family. | 0.556 |
Psyr_0805 | fusA | Psyr_0805 | Psyr_4551 | Conserved hypothetical protein. | Translation elongation factor 2 (EF-2/EF-G); Catalyzes the GTP-dependent ribosomal translocation step during translation elongation. During this step, the ribosome changes from the pre-translocational (PRE) to the post-translocational (POST) state as the newly formed A-site-bound peptidyl-tRNA and P-site-bound deacylated tRNA move to the P and E sites, respectively. Catalyzes the coordinated movement of the two tRNA molecules, the mRNA and conformational changes in the ribosome; Belongs to the TRAFAC class translation factor GTPase superfamily. Classic translation factor GTPase family. [...] | 0.976 |
Psyr_0805 | rplC | Psyr_0805 | Psyr_4548 | Conserved hypothetical protein. | LSU ribosomal protein L3P; One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit. | 0.995 |
Psyr_0805 | rplD | Psyr_0805 | Psyr_4547 | Conserved hypothetical protein. | LSU ribosomal protein L4P; One of the primary rRNA binding proteins, this protein initially binds near the 5'-end of the 23S rRNA. It is important during the early stages of 50S assembly. It makes multiple contacts with different domains of the 23S rRNA in the assembled 50S subunit and ribosome. | 0.995 |
Psyr_0805 | rplM | Psyr_0805 | Psyr_4120 | Conserved hypothetical protein. | LSU ribosomal protein L13P; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly. | 0.984 |
Psyr_0805 | rpsD | Psyr_0805 | Psyr_4525 | Conserved hypothetical protein. | SSU ribosomal protein S4P; One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the body of the 30S subunit. | 0.990 |
Psyr_1733 | Psyr_0516 | Psyr_1733 | Psyr_0516 | Peptidyl-prolyl cis-trans isomerase, cyclophilin type; PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides; Belongs to the cyclophilin-type PPIase family. | ATP-dependent RNA helicase DbpA; Belongs to the DEAD box helicase family. | 0.591 |
Psyr_1733 | Psyr_0805 | Psyr_1733 | Psyr_0805 | Peptidyl-prolyl cis-trans isomerase, cyclophilin type; PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides; Belongs to the cyclophilin-type PPIase family. | Conserved hypothetical protein. | 0.556 |
Psyr_1733 | Psyr_1794 | Psyr_1733 | Psyr_1794 | Peptidyl-prolyl cis-trans isomerase, cyclophilin type; PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides; Belongs to the cyclophilin-type PPIase family. | Amino acid adenylation. | 0.842 |