STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
HrcCOuter-membrane type III secretion protein HrcC. (700 aa)    
Predicted Functional Partners:
HrcJ
Type III secretion apparatus lipoprotein, YscJ/HrcJ family.
 
 
 0.994
HrcT
Type III secretion protein HrcT.
 
 
 0.981
HrcS
Type III secretion protein HrcS.
 
 
 0.974
HrcR
Type III secretion protein HrcR.
 
 
 0.956
HrcN
Type III secretion cytoplasmic ATPase HrcN.
 
 
 0.916
HrcU
Type III secretion protein HrcU.
 
 
 0.871
Psyr_1215
Type III secretion protein HrcV.
 
 
 0.835
HrpF
Type III secretion protein HrpF.
     
 0.806
Psyr_3466
Flagellin, C-terminal:Flagellin, N-terminal; Flagellin is the subunit protein which polymerizes to form the filaments of bacterial flagella.
      
 0.806
Psyr_1202
Negative regulator of hrp expression HrpV.
     
 0.803
Your Current Organism:
Pseudomonas syringae B728a
NCBI taxonomy Id: 205918
Other names: P. syringae pv. syringae B728a, Pseudomonas syringae pv. syringae B728a, Pseudomonas syringae pv. syringae str. B728a, Pseudomonas syringae pv. syringae strain B728a
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.