node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
Psyr_1377 | Psyr_1632 | Psyr_1377 | Psyr_1632 | CinA, C-terminal; Belongs to the CinA family. | ComEC/Rec2-related protein:DNA internalization-related competence protein ComEC/Rec2. | 0.494 |
Psyr_1377 | recA | Psyr_1377 | Psyr_1378 | CinA, C-terminal; Belongs to the CinA family. | RecA protein; Can catalyze the hydrolysis of ATP in the presence of single- stranded DNA, the ATP-dependent uptake of single-stranded DNA by duplex DNA, and the ATP-dependent hybridization of homologous single-stranded DNAs. It interacts with LexA causing its activation and leading to its autocatalytic cleavage; Belongs to the RecA family. | 0.733 |
Psyr_1377 | recX | Psyr_1377 | Psyr_1379 | CinA, C-terminal; Belongs to the CinA family. | Regulatory protein RecX; Modulates RecA activity; Belongs to the RecX family. | 0.661 |
Psyr_1632 | Psyr_1377 | Psyr_1632 | Psyr_1377 | ComEC/Rec2-related protein:DNA internalization-related competence protein ComEC/Rec2. | CinA, C-terminal; Belongs to the CinA family. | 0.494 |
Psyr_1632 | radA | Psyr_1632 | Psyr_4275 | ComEC/Rec2-related protein:DNA internalization-related competence protein ComEC/Rec2. | DNA replication and repair protein RadA; DNA-dependent ATPase involved in processing of recombination intermediates, plays a role in repairing DNA breaks. Stimulates the branch migration of RecA-mediated strand transfer reactions, allowing the 3' invading strand to extend heteroduplex DNA faster. Binds ssDNA in the presence of ADP but not other nucleotides, has ATPase activity that is stimulated by ssDNA and various branched DNA structures, but inhibited by SSB. Does not have RecA's homology-searching function. | 0.492 |
Psyr_1632 | recA | Psyr_1632 | Psyr_1378 | ComEC/Rec2-related protein:DNA internalization-related competence protein ComEC/Rec2. | RecA protein; Can catalyze the hydrolysis of ATP in the presence of single- stranded DNA, the ATP-dependent uptake of single-stranded DNA by duplex DNA, and the ATP-dependent hybridization of homologous single-stranded DNAs. It interacts with LexA causing its activation and leading to its autocatalytic cleavage; Belongs to the RecA family. | 0.647 |
Psyr_1632 | recX | Psyr_1632 | Psyr_1379 | ComEC/Rec2-related protein:DNA internalization-related competence protein ComEC/Rec2. | Regulatory protein RecX; Modulates RecA activity; Belongs to the RecX family. | 0.680 |
Psyr_1632 | ruvC | Psyr_1632 | Psyr_1408 | ComEC/Rec2-related protein:DNA internalization-related competence protein ComEC/Rec2. | Holliday junction endonuclease RuvC; Nuclease that resolves Holliday junction intermediates in genetic recombination. Cleaves the cruciform structure in supercoiled DNA by nicking to strands with the same polarity at sites symmetrically opposed at the junction in the homologous arms and leaves a 5'-terminal phosphate and a 3'-terminal hydroxyl group. | 0.490 |
Psyr_4117 | recO | Psyr_4117 | Psyr_3949 | Stringent starvation protein B. | DNA replication and repair protein RecO; Involved in DNA repair and RecF pathway recombination. | 0.716 |
Psyr_4117 | recX | Psyr_4117 | Psyr_1379 | Stringent starvation protein B. | Regulatory protein RecX; Modulates RecA activity; Belongs to the RecX family. | 0.574 |
dapF | hflX | Psyr_0183 | Psyr_0573 | Diaminopimelate epimerase; Catalyzes the stereoinversion of LL-2,6-diaminoheptanedioate (L,L-DAP) to meso-diaminoheptanedioate (meso-DAP), a precursor of L- lysine and an essential component of the bacterial peptidoglycan. | GTP-binding protein HflX; GTPase that associates with the 50S ribosomal subunit and may have a role during protein synthesis or ribosome biogenesis. Belongs to the TRAFAC class OBG-HflX-like GTPase superfamily. HflX GTPase family. | 0.817 |
dapF | recX | Psyr_0183 | Psyr_1379 | Diaminopimelate epimerase; Catalyzes the stereoinversion of LL-2,6-diaminoheptanedioate (L,L-DAP) to meso-diaminoheptanedioate (meso-DAP), a precursor of L- lysine and an essential component of the bacterial peptidoglycan. | Regulatory protein RecX; Modulates RecA activity; Belongs to the RecX family. | 0.786 |
hflX | dapF | Psyr_0573 | Psyr_0183 | GTP-binding protein HflX; GTPase that associates with the 50S ribosomal subunit and may have a role during protein synthesis or ribosome biogenesis. Belongs to the TRAFAC class OBG-HflX-like GTPase superfamily. HflX GTPase family. | Diaminopimelate epimerase; Catalyzes the stereoinversion of LL-2,6-diaminoheptanedioate (L,L-DAP) to meso-diaminoheptanedioate (meso-DAP), a precursor of L- lysine and an essential component of the bacterial peptidoglycan. | 0.817 |
hflX | recX | Psyr_0573 | Psyr_1379 | GTP-binding protein HflX; GTPase that associates with the 50S ribosomal subunit and may have a role during protein synthesis or ribosome biogenesis. Belongs to the TRAFAC class OBG-HflX-like GTPase superfamily. HflX GTPase family. | Regulatory protein RecX; Modulates RecA activity; Belongs to the RecX family. | 0.751 |
polA | radA | Psyr_0270 | Psyr_4275 | DNA polymerase I; In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity; Belongs to the DNA polymerase type-A family. | DNA replication and repair protein RadA; DNA-dependent ATPase involved in processing of recombination intermediates, plays a role in repairing DNA breaks. Stimulates the branch migration of RecA-mediated strand transfer reactions, allowing the 3' invading strand to extend heteroduplex DNA faster. Binds ssDNA in the presence of ADP but not other nucleotides, has ATPase activity that is stimulated by ssDNA and various branched DNA structures, but inhibited by SSB. Does not have RecA's homology-searching function. | 0.584 |
polA | recA | Psyr_0270 | Psyr_1378 | DNA polymerase I; In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity; Belongs to the DNA polymerase type-A family. | RecA protein; Can catalyze the hydrolysis of ATP in the presence of single- stranded DNA, the ATP-dependent uptake of single-stranded DNA by duplex DNA, and the ATP-dependent hybridization of homologous single-stranded DNAs. It interacts with LexA causing its activation and leading to its autocatalytic cleavage; Belongs to the RecA family. | 0.977 |
polA | recO | Psyr_0270 | Psyr_3949 | DNA polymerase I; In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity; Belongs to the DNA polymerase type-A family. | DNA replication and repair protein RecO; Involved in DNA repair and RecF pathway recombination. | 0.596 |
polA | recX | Psyr_0270 | Psyr_1379 | DNA polymerase I; In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity; Belongs to the DNA polymerase type-A family. | Regulatory protein RecX; Modulates RecA activity; Belongs to the RecX family. | 0.583 |
polA | ruvC | Psyr_0270 | Psyr_1408 | DNA polymerase I; In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity; Belongs to the DNA polymerase type-A family. | Holliday junction endonuclease RuvC; Nuclease that resolves Holliday junction intermediates in genetic recombination. Cleaves the cruciform structure in supercoiled DNA by nicking to strands with the same polarity at sites symmetrically opposed at the junction in the homologous arms and leaves a 5'-terminal phosphate and a 3'-terminal hydroxyl group. | 0.666 |
radA | Psyr_1632 | Psyr_4275 | Psyr_1632 | DNA replication and repair protein RadA; DNA-dependent ATPase involved in processing of recombination intermediates, plays a role in repairing DNA breaks. Stimulates the branch migration of RecA-mediated strand transfer reactions, allowing the 3' invading strand to extend heteroduplex DNA faster. Binds ssDNA in the presence of ADP but not other nucleotides, has ATPase activity that is stimulated by ssDNA and various branched DNA structures, but inhibited by SSB. Does not have RecA's homology-searching function. | ComEC/Rec2-related protein:DNA internalization-related competence protein ComEC/Rec2. | 0.492 |