STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Psyr_2103Levansucrase; Belongs to the glycosyl hydrolase 68 family. (415 aa)    
Predicted Functional Partners:
Psyr_0758
Beta-fructofuranosidase; Enables the bacterium to metabolize sucrose as a sole carbon source; Belongs to the glycosyl hydrolase 32 family.
    
 0.963
Psyr_0754
Levansucrase; Belongs to the glycosyl hydrolase 68 family.
  
  
 
0.900
Psyr_1781
Beta-glucosidase.
     
  0.900
Psyr_3035
Glycoside hydrolase, family 3, N-terminal:Glycoside hydrolase, family 3, C-terminal:Glycoside hydrolase, family 3, C-terminal; Belongs to the glycosyl hydrolase 3 family.
     
  0.900
Psyr_3153
Beta-glucosidase.
     
  0.900
Psyr_3993
Glycoside hydrolase, family 3, N-terminal:Glycoside hydrolase, family 3, C-terminal; Belongs to the glycosyl hydrolase 3 family.
     
  0.900
Psyr_0765
Conserved hypothetical protein.
  
     0.734
glk
Glucokinase; Belongs to the bacterial glucokinase family.
  
   
 0.640
Psyr_0876
TonB-dependent receptor:TonB-dependent receptor, C-terminal.
  
     0.621
Psyr_4483
TonB-dependent receptor:TonB-dependent receptor.
  
     0.543
Your Current Organism:
Pseudomonas syringae B728a
NCBI taxonomy Id: 205918
Other names: P. syringae pv. syringae B728a, Pseudomonas syringae pv. syringae B728a, Pseudomonas syringae pv. syringae str. B728a, Pseudomonas syringae pv. syringae strain B728a
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