STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
gacARegulatory protein, LuxR:Response regulator receiver; Forms part of a two-component regulatory system GacA/GacA(LemA). May be involved in lesion formation, swarming and in the production of extracellular protease, syringomycin and N-acyl-L- homoserine lactone (acyl-HSL). (222 aa)    
Predicted Functional Partners:
Psyr_3698
Histidine kinase; Response regulator receiver:ATP-binding region, ATPase-like:Histidine kinase, HAMP region:Histidine kinase A, N-terminal:Hpt.
 
 0.974
Psyr_4216
Regulatory protein, LuxR.
  
  
  0.913
uvrC
Excinuclease ABC subunit C; The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrC both incises the 5' and 3' sides of the lesion. The N-terminal half is responsible for the 3' incision and the C-terminal half is responsible for the 5' incision.
     
 0.908
Psyr_4619
Multi-sensor signal transduction histidine kinase.
 
 
 0.882
Psyr_1292
Multi-sensor hybrid histidine kinase.
 
 
 
 0.855
Psyr_1941
ATP-binding region, ATPase-like:Histidine kinase.
 
 
 0.854
Psyr_2113
Multi-sensor hybrid histidine kinase.
 
 
 
 0.819
Psyr_2445
Multi-sensor hybrid histidine kinase.
  
 
 0.805
Psyr_2940
PAS.
 
 
 
 0.724
Psyr_2895
CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase; Belongs to the CDP-alcohol phosphatidyltransferase class-I family.
     
 0.707
Your Current Organism:
Pseudomonas syringae B728a
NCBI taxonomy Id: 205918
Other names: P. syringae pv. syringae B728a, Pseudomonas syringae pv. syringae B728a, Pseudomonas syringae pv. syringae str. B728a, Pseudomonas syringae pv. syringae strain B728a
Server load: low (20%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.