Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
PhhA | PhhB | Psyr_3575 | Psyr_3576 | Phenylalanine 4-hydroxylase. | Pterin-4-alpha-carbinolamine dehydratase. | 0.997 |
PhhA | Psyr_1973 | Psyr_3575 | Psyr_1973 | Phenylalanine 4-hydroxylase. | Aspartate transaminase. | 0.957 |
PhhA | Psyr_2130 | Psyr_3575 | Psyr_2130 | Phenylalanine 4-hydroxylase. | 4-hydroxyphenylpyruvate dioxygenase. | 0.558 |
PhhA | Psyr_3325 | Psyr_3575 | Psyr_3325 | Phenylalanine 4-hydroxylase. | Fumarylacetoacetate hydrolase. | 0.730 |
PhhA | Psyr_3330 | Psyr_3575 | Psyr_3330 | Phenylalanine 4-hydroxylase. | 4-hydroxyphenylpyruvate dioxygenase. | 0.890 |
PhhA | hmgA | Psyr_3575 | Psyr_3326 | Phenylalanine 4-hydroxylase. | Homogentisate 1,2-dioxygenase; Involved in the catabolism of homogentisate (2,5- dihydroxyphenylacetate or 2,5-OH-PhAc), a central intermediate in the degradation of phenylalanine and tyrosine. Catalyzes the oxidative ring cleavage of the aromatic ring of homogentisate to yield maleylacetoacetate. | 0.875 |
PhhB | PhhA | Psyr_3576 | Psyr_3575 | Pterin-4-alpha-carbinolamine dehydratase. | Phenylalanine 4-hydroxylase. | 0.997 |
PhhB | Psyr_1973 | Psyr_3576 | Psyr_1973 | Pterin-4-alpha-carbinolamine dehydratase. | Aspartate transaminase. | 0.468 |
PhhB | Psyr_2130 | Psyr_3576 | Psyr_2130 | Pterin-4-alpha-carbinolamine dehydratase. | 4-hydroxyphenylpyruvate dioxygenase. | 0.478 |
PhhB | Psyr_3325 | Psyr_3576 | Psyr_3325 | Pterin-4-alpha-carbinolamine dehydratase. | Fumarylacetoacetate hydrolase. | 0.510 |
PhhB | Psyr_3330 | Psyr_3576 | Psyr_3330 | Pterin-4-alpha-carbinolamine dehydratase. | 4-hydroxyphenylpyruvate dioxygenase. | 0.715 |
PhhB | Psyr_3747 | Psyr_3576 | Psyr_3747 | Pterin-4-alpha-carbinolamine dehydratase. | Asparagine synthase (glutamine-hydrolysing). | 0.605 |
PhhB | Psyr_4315 | Psyr_3576 | Psyr_4315 | Pterin-4-alpha-carbinolamine dehydratase. | Asparagine synthase, glutamine-hydrolyzing. | 0.605 |
PhhB | hmgA | Psyr_3576 | Psyr_3326 | Pterin-4-alpha-carbinolamine dehydratase. | Homogentisate 1,2-dioxygenase; Involved in the catabolism of homogentisate (2,5- dihydroxyphenylacetate or 2,5-OH-PhAc), a central intermediate in the degradation of phenylalanine and tyrosine. Catalyzes the oxidative ring cleavage of the aromatic ring of homogentisate to yield maleylacetoacetate. | 0.868 |
PhhB | purU | Psyr_3576 | Psyr_2226 | Pterin-4-alpha-carbinolamine dehydratase. | Formyltetrahydrofolate deformylase; Catalyzes the hydrolysis of 10-formyltetrahydrofolate (formyl-FH4) to formate and tetrahydrofolate (FH4). | 0.512 |
PhhB | purU-2 | Psyr_3576 | Psyr_4018 | Pterin-4-alpha-carbinolamine dehydratase. | Formyltetrahydrofolate deformylase; Catalyzes the hydrolysis of 10-formyltetrahydrofolate (formyl-FH4) to formate and tetrahydrofolate (FH4). | 0.512 |
Psyr_1973 | PhhA | Psyr_1973 | Psyr_3575 | Aspartate transaminase. | Phenylalanine 4-hydroxylase. | 0.957 |
Psyr_1973 | PhhB | Psyr_1973 | Psyr_3576 | Aspartate transaminase. | Pterin-4-alpha-carbinolamine dehydratase. | 0.468 |
Psyr_1973 | Psyr_2130 | Psyr_1973 | Psyr_2130 | Aspartate transaminase. | 4-hydroxyphenylpyruvate dioxygenase. | 0.937 |
Psyr_1973 | Psyr_3325 | Psyr_1973 | Psyr_3325 | Aspartate transaminase. | Fumarylacetoacetate hydrolase. | 0.537 |
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